Gene Dred_1661 details

Gene Information

• Locus tag: Dred_1661
• Symbol: ruvA
• ID: 4958399
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfotomaculum reducens MI-1
• Kingdom: Bacteria
• Replicon accession: NC_009253
• Strand: +
• Start bp: 1818502
• End bp: 1819101
• Gene Length: 600 bp
• Protein Length: 199 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 640180837
• Product: Holliday junction DNA helicase RuvA
• Protein accession: YP_001113014
• Protein GI: 134299518
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0632] Holliday junction resolvasome, DNA-binding subunit
• TIGRFAM ID: [TIGR00084] Holliday junction DNA helicase, RuvA subunit

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.133352
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTGCGT ATATAAAGGG TTTATTAGCA GCCGATGGGC CAGGTTGGGT AGTTATAGAT 
GTGAATGGTA TCGGCTATCA TGTAAGTATA CCATCAACCA CCCAGTTGCC TGCTCTGGGG 
CACGAGGTTA AGCTTTTCAC TCATATGAGT GTAAGGGAAG ATGGCATTCA GTTCTTTGGT 
TTCGCCAAGG AAGATGAAAA GGAATGTTTT TTGCTATTGC TAAATGTGGC GGGCGTAGGT 
CCCAAGGTAG CTCTGGCAGT AGTGTCACAT TTGCCGCCAA GCAACCTAAG ATCGGCCATA 
GCCATAGAAG ATGTTAATCA ATTGGTGAAA GTACCCGGTG TAGGTAAAAA AACTGCACAA 
AGAATATTGC TGGAACTGAA AGATAAACTC AAGGGAATGG CAGCAGTGGA GCATAGTACG 
CTACAACAAT CGGTCATTAC CACGGGAAGT GGAGACGAGG CTGTCGAGGC GCTGCTGGCA 
CTGGGATATT CCCAAGGAGA AGCCAGGGAT GCAGTAAAAA AGGCACAAAA AAGTGCACCA 
GAAGAGGATT TATCTGCCTT GATTAAAATA GCTCTCAAAG AACTGGCACC GTCCAGGTAA 

 

Protein sequence

MIAYIKGLLA ADGPGWVVID VNGIGYHVSI PSTTQLPALG HEVKLFTHMS VREDGIQFFG 
FAKEDEKECF LLLLNVAGVG PKVALAVVSH LPPSNLRSAI AIEDVNQLVK VPGVGKKTAQ 
RILLELKDKL KGMAAVEHST LQQSVITTGS GDEAVEALLA LGYSQGEARD AVKKAQKSAP 
EEDLSALIKI ALKELAPSR