Gene Dred_1658 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1658 
Symbol 
ID4957967 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp1816335 
End bp1817063 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content41% 
IMG OID640180834 
Producthypothetical protein 
Protein accessionYP_001113011 
Protein GI134299515 
COG category[S] Function unknown 
COG ID[COG0217] Uncharacterized conserved protein 
TIGRFAM ID[TIGR01033] DNA-binding regulatory protein, YebC/PmpR family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTCGGGAC ACTCAAAATG GTCAACAATT AAACGTAAAA AAGCTAAAAT TGACTCCCAG 
AGAGGGAAGG TATTTACCAA ATTATCTAAA GAAATTATTA TTGCTGCCAG AAATGGTGGG
GCAGACCCCA ATGGCAATAT GCGTCTGAAA GCTGCCATCG AGAAGGCCAA AATTGCCAAT
ATTCCCAATG ACAATATTCA AAGGGCAATT CAAAAGGGCG CAGGCGGTGG AGACGGTGCT
AATTTTGAAG AATTTAGTTA TGAAGGTTAC GGCCCAGGCG GTATCGCAAT TCTATTAAAT
GTAGCAACAG ACAATCGCAA TAGAACTGCC GGAGAAGTAA GACATATATT ATCAAAGCAC
GGTGGTAATC TGGGTGAAAC TGGTTGTGTG AACTGGATGT TTGATGAAAA GGGTATTATT
ATTATTGATC GATCTGAGGT CAATATGAGT GAAGATGATA TTATGCTGGC AGCCCTTGAG
GCTGGTGCCG AGGACGTAAA GGTTGAGGAT GACAGTTTTG AAATTAGTAC TGCACCTGAG
GATTTACAAT CAGTAAAGAC AGCCCTAATT GATCAAGGAA TTCCTGTGGC CGACGCAGAT
ACAACCATGG TACCTCAAAC CACTGTAAAA TTACAAGGTG AAGACGCTGA GAAGATGAAC
AAAATGATCG AGTTATTAGA AGATAACGAT GATATTCAAG AGGTATTTAC AAACTACGAA
GAAGAGTAA
 
Protein sequence
MSGHSKWSTI KRKKAKIDSQ RGKVFTKLSK EIIIAARNGG ADPNGNMRLK AAIEKAKIAN 
IPNDNIQRAI QKGAGGGDGA NFEEFSYEGY GPGGIAILLN VATDNRNRTA GEVRHILSKH
GGNLGETGCV NWMFDEKGII IIDRSEVNMS EDDIMLAALE AGAEDVKVED DSFEISTAPE
DLQSVKTALI DQGIPVADAD TTMVPQTTVK LQGEDAEKMN KMIELLEDND DIQEVFTNYE
EE