Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_1654 |
Symbol | |
ID | 4957024 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | - |
Start bp | 1810542 |
End bp | 1812521 |
Gene Length | 1980 bp |
Protein Length | 659 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640180830 |
Product | hydrogenases, Fe-only |
Protein accession | YP_001113007 |
Protein GI | 134299511 |
COG category | [C] Energy production and conversion [R] General function prediction only |
COG ID | [COG1905] NADH:ubiquinone oxidoreductase 24 kD subunit [COG4624] Iron only hydrogenase large subunit, C-terminal domain |
TIGRFAM ID | [TIGR02512] hydrogenases, Fe-only |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.357121 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGGAA AAATTACCAT TAATGGTCAA ATTATAGATT TTACCGATGA AAAGAATATT CTGGCTGTTG CACGAAAAGT AGGTATTGAT ATCCCTACCC TCTGCTATCA TCCTGAACTA ACCATTGCGG GTGCTTGTCG TTTGTGTGTG GTAGAAATTG AGAGAATGGG CGTTCAGGCT TCCTGTTCTA CCGCTCCCAC AGATGGTATG GTGGTTTATA CCAATTCAGA AAAAGTTAAC AGAGTACGCA AAATGGTACT GGAACTCCTT TTGGCAAATC ACGACCGTGA GTGTACAACC TGTGACTCCA GCGGGGCTTG CAAACTTCAA AAGTATGCCA ATGACTATGG TATTAAACGT TTGCGCTATC CAAATCGTAC AACAATGGCT CCATTGGATA CTTCAAGCCT GTCTATTGTT CGGGATCCCA ACAAGTGTAT CCTATGCGGT TTATGTGTAC GGGTATGTAA AGAAAAACAA GGCATTGGTG TATGGGATTT CAAAAACCGT GGTTCTCGTA CTGATATTGT TGCCGCTATG GATCAGCCTT TGTCTGAATC TGCTTGTATT AACTGCGGTC AGTGCATCGC GGTTTGTCCT ACAGGAGCCC TTACATCCAA CTCCTCTTCT ATACAAGAAA TTTGGGCGGC CATTCGTGAT CCTAAAAAGA CCGTTGTTTG CCAGATAGCC CCGGCTCCCA GAGCAGCCCT CGGAGAAGAA TTTGGCCTGG GTTCCGTTGA TGTAACTAAA AAAGTCGTAA CAGCTCTGCG TAAAATAGGT TTTGACAAAG TCTTCGACAC AGTATTCACA GCCGATATGA CAACCATCGA AGAGTCCAAT GAATTTTTAA GCAGGCTTGT AAAGGGAGAG AATCTTCCCC TCTTTACCTC CTGTTGCCCC GGTTGGGTAA AATATGCGGA GGAATTCCAT CCTGAACTGC TTAGCAATTT ATCGAGTTGC CGGTCACCAC AACAAATGTT TGGTGCTGTA TTAAAGAAAA AGTACGCCAA GGAACTGGGG ATTGCCCCAC AAGATATGTT TGTGGTATCG GTGATGCCCT GTACCGCTAA AAAATATGAA GCAAAACGTC CGGAGTTTAC CACCGAAGGC GCCTATGATG TAGACGCAGT ATTAACAACT GTTGAAGCTG CCCGGATGAT TAAAGAAGCT GGCATTATTT TCAATACACT AGAAGAATCG GAATTTGACC AACCGATGCA ACAAGCTACC GGTTCTGGAG TATTGTTTGG TACCACTGGT GGGGTAATGG AATCTGTCAT TCGTTACGTT GCCGGGAAAC TTCTCAATGC AGAAGGCCGA GTTGACGTAG AATTCACCCG TGGTATGGAA GATACTAAAA TTGCCAGCAT AAATGTAGGT GACAATAAGC TAAATCTGGC TGTGGTAAAT GGACTGTCTG CCACAGAAGC TTTAATTCAA AAGATCCAGT CTGGTGAATT AGATGTTCAG GCAGTAGAAG TTATGGCTTG TCCCGGTGGC TGTGTAGGAG GCGGCGGCCA GCCCTTCCAA AATGATAACG AACACCGCAA AGCCAGGGCC AGTGAAATTT ATGGTATTGA TGCAAAACTA GAGCTTCATA AAGCACAGGA TAATGAAGAT CTAAATAAAA TTTTTGAAAA ATATTGGGGT GGTTGCTGCA ACCATGATAC CCACCATGAT TTGCACACCC ACTATAATCC CAAAAGACGT GTTGCCGGTA ATGAAATTGT AATCAAAGAT GGTAATGGTC CAGAAATAAC CGTATGTATT GGCGAAGGTT GCATGAAAAA AGGTTCCATT AGTTTAATAG AAAAGCTAGT TAACTTACCA GTTAAAGTCA AAGGTGTTTT CTGTCTAGAA AACTGTGGCA ACGGTGTATC CGTTAAGGTT AATGATGAAA TCCTACACGT CACTCCAGAA AATGCTTTAG AATCCATTCA AAAAAAGTGC GGTTGTAGTT GTGGTTGCTG CTCTAAATAG
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Protein sequence | MSGKITINGQ IIDFTDEKNI LAVARKVGID IPTLCYHPEL TIAGACRLCV VEIERMGVQA SCSTAPTDGM VVYTNSEKVN RVRKMVLELL LANHDRECTT CDSSGACKLQ KYANDYGIKR LRYPNRTTMA PLDTSSLSIV RDPNKCILCG LCVRVCKEKQ GIGVWDFKNR GSRTDIVAAM DQPLSESACI NCGQCIAVCP TGALTSNSSS IQEIWAAIRD PKKTVVCQIA PAPRAALGEE FGLGSVDVTK KVVTALRKIG FDKVFDTVFT ADMTTIEESN EFLSRLVKGE NLPLFTSCCP GWVKYAEEFH PELLSNLSSC RSPQQMFGAV LKKKYAKELG IAPQDMFVVS VMPCTAKKYE AKRPEFTTEG AYDVDAVLTT VEAARMIKEA GIIFNTLEES EFDQPMQQAT GSGVLFGTTG GVMESVIRYV AGKLLNAEGR VDVEFTRGME DTKIASINVG DNKLNLAVVN GLSATEALIQ KIQSGELDVQ AVEVMACPGG CVGGGGQPFQ NDNEHRKARA SEIYGIDAKL ELHKAQDNED LNKIFEKYWG GCCNHDTHHD LHTHYNPKRR VAGNEIVIKD GNGPEITVCI GEGCMKKGSI SLIEKLVNLP VKVKGVFCLE NCGNGVSVKV NDEILHVTPE NALESIQKKC GCSCGCCSK
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