| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_1641 |
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| Symbol | |
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| ID | 4955346 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | + |
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| Start bp | 1789345 |
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| End bp | 1791069 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640180817 |
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| Product | ABC transporter, transmembrane region, type 1 |
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| Protein accession | YP_001112994 |
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| Protein GI | 134299498 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4988] ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components |
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| TIGRFAM ID | [TIGR02857] thiol reductant ABC exporter, CydD subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAGATA AAAGACTATT AAAAGAGGCA AGAAAAGTAC GTCTGTTCCT GGCCCTTACC
ATAGGCCTTG GCATAGCCAC CGGACTGCTG GTGGTTCTCC AGGCAAAGAC CATGGCCAGC
ATTGTAAGCC AGGTATTTAT CGAAAATGCT CATTTGGCCC AGGTGCAAAG CCCATTGCTG
CTTTTGCTGG GGTTCATGGT TAGCCGGGCC TTTTTGGCCT GGTTCAGTGA GGTCAGTGCC
CATCGGGTGG CGGCTCTCAT CAAAGGGGAT CTCCGCAGAA GATTACTGCA GCATCTTTAT
GACCTTGGAC CCATCCATGC CCGGGGCGAA CGAACCGGTG AATTGACGAA TCTGATGCTG
GAGGGTATTG AATCTTTGGA GGATTACTTT GCCAAGTATC TACCCCAACT GGTATTGGTG
GCTACGGTGC CCTGTATTAT TCTAGTTTTT GTTGTGCCCA TAGATCTAGC TTCAGGGCTT
ATTCTTTTAT TTACTGCCCC CCTGATACCT TTTTTTATGA TTCTCATTGG CAAATGGGCA
GATCACCTGA CCAAACGTCA GTGGAGCCTA TTAAGTCGGT TGAGTGCGCA TTTCTTGGAT
GTCCTGCAGG GGCTTGCCAC TTTGAAGCTA TTTGGCAGAA GCAAGGATCA AATCCGTATT
ATTGGCAGAC TTAGTGATGA TTTTCGACGC ACCACCATGG GCGTGTTGCG TGTGGCCTTT
CTCTCGGCCT TGGTGCTGGA ACTCCTTTCC ACCATCAGTA CAGCTTTGGT GGCAGTGGCA
TTGGGGTTAC GTCTTGTTTA CGGCCATATT TCCTTTGAAA GTGCTTTTTT TCTAATATTA
CTGGCACCGG AATTTTATTT GCCCCTGCGA CTGCTGGGTA CCCAGTTTCA TGCCGGGATG
AACGGGGTTC AGGCGGCCAA CCGCATATAT GAGATTTTAA ATAAACCGGC CCCCCGAAAT
ATTTCTGGTA TAAAAGTAGA AAAGCCAGAA AAAATCCACC TATCTTTGCG GGAGGTTCAT
TTTTCCTACC ATGAAGCATC ACCCATTTTG CAGGGCATAT CCTTTGATCT TTGTCCCGGA
CAAAGGGTGG CCTTGGTGGG ACCCAGTGGA GCAGGGAAAT CCACCCTTGT GAATCTTCTC
ATGGGCTTTA TTCAACCAAC CCAAGGTACC ATTGAGGTTA ATGGCATTCC TTTGGAAAAT
TTAGCTGGCA ATGCATGGCG GCATATGATT GCGCTGGTGC CGCAAAATCC ATATATTTTT
TATGGAACAG TGGCGGAAAA TATTTTACTT GGCAGGCCCC AAGCAACCAT GGATGAGGTA
GTGGATGCAG CCAAAAGGGC TGAGATCCAC GATTTTATTA AGGATTTGCC CCAGGGTTAT
GCTACGCCGG TGGGAGAACA CGGGTTGAGG CTTAGTGGAG GTCAGGCCCA GCGTCTGGTC
ATAGCCAGGG CATTTTTGAA AAATGCACCT GTTTTAGTGT TGGATGAGGC TACCGCTGGT
TTGGACCCGT TTACAGAACT GGCCATTCAG GAAACCCTAG AGCAATTAAT TGTGGGACGT
ACGGTTTTGG TGATTGCCCA CCGATTAGCA ACTGTCTATG GAGCCGAACG TATTTTGGTG
CTGCGAGAAG GTAAATTAGT GGAGCAGGGA CAGCACCAGC AGCTGATGGC ACAACAAGGA
GTCTATTACG ACTTAGTGAA AGCCTATAGG GGGGAGAAAG GATGA
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| Protein sequence | MIDKRLLKEA RKVRLFLALT IGLGIATGLL VVLQAKTMAS IVSQVFIENA HLAQVQSPLL
LLLGFMVSRA FLAWFSEVSA HRVAALIKGD LRRRLLQHLY DLGPIHARGE RTGELTNLML
EGIESLEDYF AKYLPQLVLV ATVPCIILVF VVPIDLASGL ILLFTAPLIP FFMILIGKWA
DHLTKRQWSL LSRLSAHFLD VLQGLATLKL FGRSKDQIRI IGRLSDDFRR TTMGVLRVAF
LSALVLELLS TISTALVAVA LGLRLVYGHI SFESAFFLIL LAPEFYLPLR LLGTQFHAGM
NGVQAANRIY EILNKPAPRN ISGIKVEKPE KIHLSLREVH FSYHEASPIL QGISFDLCPG
QRVALVGPSG AGKSTLVNLL MGFIQPTQGT IEVNGIPLEN LAGNAWRHMI ALVPQNPYIF
YGTVAENILL GRPQATMDEV VDAAKRAEIH DFIKDLPQGY ATPVGEHGLR LSGGQAQRLV
IARAFLKNAP VLVLDEATAG LDPFTELAIQ ETLEQLIVGR TVLVIAHRLA TVYGAERILV
LREGKLVEQG QHQQLMAQQG VYYDLVKAYR GEKG
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