Gene Dred_1628 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1628 
Symbol 
ID4956966 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp1773382 
End bp1773891 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content36% 
IMG OID640180804 
ProductCRISPR-associated Csm2 family protein 
Protein accessionYP_001112981 
Protein GI134299485 
COG category 
COG ID 
TIGRFAM ID[TIGR01870] CRISPR-associated protein, Csm2 family 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGACT GGAAAAAACA GTTGCAGGGT TATAAAGATA AACAAGGTAA TAGGAACCAA 
CCCCACCAAG GTAAACGAGA TAAAAATGAT ATGGGTTATC AGCGGTATAC CACACCAGGA
TTACCTGATG GCTATTTAAG CAAAGGTTAT TTTGATGATC AAGGGTGTCT ATTAGAAATA
CTTTTAACTG AAACAGCATC AAAAATTGCT AAGAGCTTTG GATCAAATAT GAACAATAGT
CAGTTGAGGA GATTTTATGG CCATGCAAAG ACGGCAGAAA AAAGCTATGC ATTTTCTGGA
GATGAGCGTA AGTTTATAAA TGATATAAAA GCACTGGATT CTTTTGTAGC TGAGGCCAAG
GGTAAGGATA AAGTTCCTCA GATTTTCTAC GATTTTATTA ATGTAAATGT TGCTAAGGCG
AATTCATTAA AGGATATCAA ACAGGGATTC TTGCCTCACT TCCAGGCAGT GGTAGCCTAC
TTTACCTATC ATTATCCTAA GAGTAAATAA
 
Protein sequence
MSDWKKQLQG YKDKQGNRNQ PHQGKRDKND MGYQRYTTPG LPDGYLSKGY FDDQGCLLEI 
LLTETASKIA KSFGSNMNNS QLRRFYGHAK TAEKSYAFSG DERKFINDIK ALDSFVAEAK
GKDKVPQIFY DFINVNVAKA NSLKDIKQGF LPHFQAVVAY FTYHYPKSK