Gene Dred_1626 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1626 
Symbol 
ID4957148 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp1770483 
End bp1770761 
Gene Length279 bp 
Protein Length92 aa 
Translation table11 
GC content38% 
IMG OID640180802 
ProductCRISPR-associated Cas2 family protein 
Protein accessionYP_001112979 
Protein GI134299483 
COG category[L] Replication, recombination and repair 
COG ID[COG1343] Uncharacterized protein predicted to be involved in DNA repair 
TIGRFAM ID[TIGR01573] CRISPR-associated endoribonuclease Cas2 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACAGT ATATTATTAG CTATGACATA ACAAACGATA AAAGACGGAA TAAAATACGC 
AAGTTATTAT GCGACTACGC TGTACCGGTT CAATACAGTG TTTTTGAAGC GCGGCTGAGT
GAAGAGGATT ACATAATGTT AAGGCATAAA TTATCACGGC TTCTCAGGAA GGACGAAGAT
AGCATTATTT TTTATTTGCA GTGTTCCAGA TGCAGGGATG GTATAATAAG GCTAGGGAAT
TGCAGCGACC CATTTGGAGA CGGGATATAT ATTGTGTAA
 
Protein sequence
MKQYIISYDI TNDKRRNKIR KLLCDYAVPV QYSVFEARLS EEDYIMLRHK LSRLLRKDED 
SIIFYLQCSR CRDGIIRLGN CSDPFGDGIY IV