| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_1625 |
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| Symbol | |
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| ID | 4957420 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | + |
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| Start bp | 1768844 |
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| End bp | 1770478 |
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| Gene Length | 1635 bp |
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| Protein Length | 544 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640180801 |
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| Product | CRISPR-associated Cas1 family protein |
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| Protein accession | YP_001112978 |
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| Protein GI | 134299482 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1468] RecB family exonuclease
[COG1518] Uncharacterized protein predicted to be involved in DNA repair |
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| TIGRFAM ID | [TIGR00287] CRISPR-associated endonuclease Cas1
[TIGR00372] CRISPR-associated protein Cas4 |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.575155 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGAAC ATAATATATC CAATGAACAG CATTACTTTC CAATTTCTTC TGTGGCAGAA
ATACTTTACT GCCCGAGAAA CTTTTACTAC CGGGTGGTTG AAGGGGCAGA AGATTCTAAC
CACCATCTAT TGGAGGGCAA GTTGCAGGAG GAACGGCGGG ACGAAAGACA GCGACTGGTT
CGGGAAGGTT ACCGTCAAGA TAGGTCCATT CATGTTTCTT CAGAAAAACT TAACCTTTAT
GGTATTGTAG ATATAGTGGA GCAGGGTAAA GAGATTTACC CGGTGGAATA TAAGAAGGGC
TTTCGAAAGG AAAGTTTGAA TGATGATGTC CAGGTTTGTG CCCAGGCTAT GGCTCTGGAA
GAAAAACTAG GTCAAGATAT TAACCGGGGA TATATTTATT ACGCTGGGTC CAAAGCTAGG
CGTGAAGTAA TATTTGATGA AGACTTGCGA CTGATGGTAG AGAATGCGGT TGGCCTGGCC
AGAAATATTG CTTTGTCAGG GGAGATACCG CCACCACTGG CTGATAACCG TTGTGAAGGC
TGTGCCCTGG TAAATCGTTG TCTTCCCTTT GAAGTGAAAG GGATCAAAGA AAACAAGGCA
AAGGCAGTTC GCCCCCAACC AGGAATTAAC CTAGGCAGGG TTCTATATGT GGACGAACAG
GGTGCATCCC TTTATAAAAA GGGAGAACGG GTGCTGGTAA CAAAAGATCA AATAAAATTT
AAAGATATAC CACTATGCAA CCTGGATCAA GTGGTCCTTG TGGGGAATGT CAATTTATCT
TCCCAGTTAA TTAAACTTTT TTTGGGAAGA GGTACAGAGG TCCATTTTAT ATCCACAAAG
GGAAAATACT ATGGCTGTCT TCAGGCTGCC CTGTCAAAAA ACTCTGTTTT GCGTATTGCC
CAGCATCGGG CCTACCAGAA GCAAGAGGAG CGCCTGCTCT ATGCCAGTGA ATTTGTTCGT
GGAAAGCTAT CCAATATGCG AACCAATTTA TTAAGATATA ACCGATCGTT AAATAACCAT
AGTATTGATG AAGCTGTATC AAGAATAAAA AATATTATCA AAAGGTTGGA GAAGGCCAAA
GATCTTAATG AGTTGATGGG TTTGGAGGGG GCTGGTTCCC GAGATTATTT TAGTGTGTTT
GGCCTGCTTA TTAAGGATAG AGTACCCTTT GATTTTAATA AGCGCAGCAG GCGCCCTCCT
GAAGACCCGG CCAATGCGCT CCTAAGTTTT AGCTACTCTC TGCTGTTAAA AGATGTGATC
ACAGCCGTTC AGGTGGTAGG TTTTGACCCA TTTATTGGGT TTCTTCATAG GTCTGATTTT
GGTCGACCTG CCCTGGCCCT GGATATAATA GAAGAGTTTC GGCCAGTAGT GGCAGACTCA
GTTGTGCTAA CGGCTTTAAA CAAAGGTGTT ATTGCAGAAG GGGATTTTGA GTACAGGATG
GGTGGATGTT TTTTAAGTGA AACCGGGCGT AAAAAAATGT ATCGGCTTTA CGAAGAGCGC
AGAAAGGAAA TGATTACCCA TCCGGTTTTT GGCTACCGTA TTTCCTACCT GCGTACCATA
GAATTACAAG CACGATTTTT GGCAAAAGTC CTTACTAAGG AAATCGATGG GTATAAACCT
TTTCTTGTTC GGTAG
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| Protein sequence | MAEHNISNEQ HYFPISSVAE ILYCPRNFYY RVVEGAEDSN HHLLEGKLQE ERRDERQRLV
REGYRQDRSI HVSSEKLNLY GIVDIVEQGK EIYPVEYKKG FRKESLNDDV QVCAQAMALE
EKLGQDINRG YIYYAGSKAR REVIFDEDLR LMVENAVGLA RNIALSGEIP PPLADNRCEG
CALVNRCLPF EVKGIKENKA KAVRPQPGIN LGRVLYVDEQ GASLYKKGER VLVTKDQIKF
KDIPLCNLDQ VVLVGNVNLS SQLIKLFLGR GTEVHFISTK GKYYGCLQAA LSKNSVLRIA
QHRAYQKQEE RLLYASEFVR GKLSNMRTNL LRYNRSLNNH SIDEAVSRIK NIIKRLEKAK
DLNELMGLEG AGSRDYFSVF GLLIKDRVPF DFNKRSRRPP EDPANALLSF SYSLLLKDVI
TAVQVVGFDP FIGFLHRSDF GRPALALDII EEFRPVVADS VVLTALNKGV IAEGDFEYRM
GGCFLSETGR KKMYRLYEER RKEMITHPVF GYRISYLRTI ELQARFLAKV LTKEIDGYKP
FLVR
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