| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_1605 |
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| Symbol | |
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| ID | 4956174 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | - |
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| Start bp | 1744646 |
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| End bp | 1745392 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640180780 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_001112958 |
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| Protein GI | 134299462 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | [TIGR02764] polysaccharide deacetylase family sporulation protein PdaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0764982 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGAGTTT TTGTTTTTGA CTACCGTAAA TTTAAAAAAC AAGTACTGCT TTTGGGAACT
TTCTTTCTCT GTGCCGTTTT CTTCACAACC ATGTTATATC AGCAACAGAT GCTGCCAACC
ACTGCAAAAA AATATGCCAT TTATAAAGTA AAAACCGATA AAAAGGTGGT GGCCTTAACC
TTTGATATTA GTTGGGGCAC CAAAGTGCCG GGTCCGGTTC TGGATACCTT AAAAAAACAC
AATGTTAAAT CCACCTTTTT CATTTCGGGT CCCTGGGCCG TAAAACACCC TGAATTTCCC
AAAAGAATTG TGGCAGAGGG ACATGAAATA GCCAGCCACG GTGAAGAACA CGTAAACCTA
AGCGAATACA ACAAGGATGA AGTAAAGAAA AACATTCTTA CGGCACATGG TAAAATTAAA
GAAGTCACCG GCGTAGAACC ATCTTTAATT CGTACACCTA ATGGCGACTG GAACGACATG
GTACTTACCA CCGCAGAGGA ACTAAATTAC CGCGTCATCC AGTGGAGTGC CGATTCACTG
GATTGGAAAA AACCCGGTGT ACAGGCCATT GTGGATCGAG TTTTAAAAAA AACAGAACCT
GGTGCAATTA TCCTAATGCA TGCCAGTGAC ACTTGTCTCC AAACGCCTGA AGCACTGCCC
CAGGTGCTGG AAGGTCTTAA AGAAAAGGGT TATACATTGG TAACTGTTTC GGAACTTCTT
AAACATGGCG AAGGAACCAT CGATTAA
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| Protein sequence | MRVFVFDYRK FKKQVLLLGT FFLCAVFFTT MLYQQQMLPT TAKKYAIYKV KTDKKVVALT
FDISWGTKVP GPVLDTLKKH NVKSTFFISG PWAVKHPEFP KRIVAEGHEI ASHGEEHVNL
SEYNKDEVKK NILTAHGKIK EVTGVEPSLI RTPNGDWNDM VLTTAEELNY RVIQWSADSL
DWKKPGVQAI VDRVLKKTEP GAIILMHASD TCLQTPEALP QVLEGLKEKG YTLVTVSELL
KHGEGTID
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