Gene Dred_1602 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1602 
Symbol 
ID4956136 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand- 
Start bp1743015 
End bp1743710 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content44% 
IMG OID640180777 
Producthypothetical protein 
Protein accessionYP_001112955 
Protein GI134299459 
COG category[S] Function unknown 
COG ID[COG0398] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAAAAA AAGTGACTTT TATGATTGTT GCCGCTTCGT TGATCGTGGT ATTATTCTAT 
GTTCTTGATA TCCATACCCT CCCAATTTGG CAGTCACACC ATTTTAATAA TCCAGAGAAT 
CTGGCAGAAT ACATCCGCTC CTTTGGCGCT ATGACTGTTG TGATAAGTCT GTCTTTAATG 
GTACTGCAAA CTCTCTTCAC ACCCCTCCCC CTCTTTTTAC TGGCAGGGGC CAATGGTTTT 
ATATTTGGCG TCTGGTACGG CATTTTGATT ACACTGGTTG GCTCTATCCT CGGAGCTACA 
ATTGCTTTTT ATGTTGCCCG GGGTTTTGGA AGAGGTATGT TATCACGTTA TCTGAAAGAA 
AACTATCTGG CAAAGGTTGA CGAAATGAGT TGCCGGGAAG GCCCGTGGAT GGTGTTTATG 
GCCCGATTAA TACCTGTGAT TCCTTCCAGC ATCATCAGCT ACTTAGCCGG TTTAAGCAAA 
ATGACCTTCC GGGGCTTTTT TGTTGCCACG GCCATTGGCA AAGTACCCGA AATTGTGATC 
TACACTGCCC TGGGTCATAG CTTTAGTCAA GCCGAAGGAC TAGCCACTAA AGTAACGATT 
CTCCTCATCC TCGTTACTAT TGTTGCTTGG CCATTGATAT CGCGAAAGAT TAAAAATAAC 
AAGAAACCCC CACATAAAAT ACCCCCCGAT CAATAA
 
Protein sequence
MIKKVTFMIV AASLIVVLFY VLDIHTLPIW QSHHFNNPEN LAEYIRSFGA MTVVISLSLM 
VLQTLFTPLP LFLLAGANGF IFGVWYGILI TLVGSILGAT IAFYVARGFG RGMLSRYLKE 
NYLAKVDEMS CREGPWMVFM ARLIPVIPSS IISYLAGLSK MTFRGFFVAT AIGKVPEIVI 
YTALGHSFSQ AEGLATKVTI LLILVTIVAW PLISRKIKNN KKPPHKIPPD Q