Gene Dred_1586 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1586 
Symbol 
ID4958361 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp1726843 
End bp1727829 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content44% 
IMG OID640180760 
Productsecretion protein HlyD family protein 
Protein accessionYP_001112939 
Protein GI134299443 
COG category[V] Defense mechanisms 
COG ID[COG1566] Multidrug resistance efflux pump 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.125031 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAAA GAGTAGTGGC TTTTATCTTA GTAGGATTAC TGGCTGGTGT TTTGTACTGG 
GGTTATCAAC GTTTTTATAA TCCCCAAGAA TCAGCTTTAA CTGCCAGTGG GACAATCGAG
GTAACAAAGG TGGAGCTCAG TGCCAAGCTT CCTGGAACCA TTGGCGCTAT TTCTGTAGTT
GCTGGGGATA AGGTAAAAAA AGGACAACTG GTTGGTCAGA TAATCAGAAA TGATCTGGTT
GCTCAAAAGG AACGGGATGC ATTGGGTGTA CTTAAGACTG AAAGTCAGTT AAAGGATCTC
AACTCCGGAG CCAGAGTACA GGAGATCAAG GAGGCATCGG CCAATGTAAA CGTTGCCCAA
GCTTCTTATG AAAAAGCACT GGCAGATTAT GAAAGGGGGG AGAAGTTATT TCAAGCAGCA
GCTCTCCCAC AGGAACAATT AGAAAAGCTT CAGACTGATC TTAGGATTAA AGAAAACCAA
CTGGCATCAT TCAGTGCTAA GCTAAGTTTA CTAGAGGAAG GTAACCGTCC AGACGCCATT
AAAGCTGCTC AAATAGAAAT GGAGCGTGCA CGGGCAATTT TGAAAGCCTC CGAGGCCCTG
TTGGCAGATA CTAAGATATT CTCTCCGGTG AGCGGAATAG TCTTATCCAA AAATCAGGAA
CCTGGGGAAT TTGTTCAGGC CGGGGTATCT CTTGTTACGG TGGCGGATCT AAACGATATG
TGGATTCGCG TTTATGTACC CACAGATGAC CTACCTAAGC TGAGATTGGG GCAAGAAGTT
TATTTTACTG TTAGTGGCAG TAATGATCAT TATGCTGGTC AGATAGAAGA AATAGCTTCT
CAGGGTGAAT ACACTCCTAA AACTATACAG ACAAAAAATG AACGCACTAA CATAGTTTAT
GCTGTAAAGA TTCGGGTCAC GAAACCCAAC GGAACTTTGA AACCCGGTAT GCCCGCAGAT
GTGGTATTTC AACAGCGGGG TGAGTAA
 
Protein sequence
MKKRVVAFIL VGLLAGVLYW GYQRFYNPQE SALTASGTIE VTKVELSAKL PGTIGAISVV 
AGDKVKKGQL VGQIIRNDLV AQKERDALGV LKTESQLKDL NSGARVQEIK EASANVNVAQ
ASYEKALADY ERGEKLFQAA ALPQEQLEKL QTDLRIKENQ LASFSAKLSL LEEGNRPDAI
KAAQIEMERA RAILKASEAL LADTKIFSPV SGIVLSKNQE PGEFVQAGVS LVTVADLNDM
WIRVYVPTDD LPKLRLGQEV YFTVSGSNDH YAGQIEEIAS QGEYTPKTIQ TKNERTNIVY
AVKIRVTKPN GTLKPGMPAD VVFQQRGE