Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_1586 |
Symbol | |
ID | 4958361 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | + |
Start bp | 1726843 |
End bp | 1727829 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640180760 |
Product | secretion protein HlyD family protein |
Protein accession | YP_001112939 |
Protein GI | 134299443 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.125031 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAAAA GAGTAGTGGC TTTTATCTTA GTAGGATTAC TGGCTGGTGT TTTGTACTGG GGTTATCAAC GTTTTTATAA TCCCCAAGAA TCAGCTTTAA CTGCCAGTGG GACAATCGAG GTAACAAAGG TGGAGCTCAG TGCCAAGCTT CCTGGAACCA TTGGCGCTAT TTCTGTAGTT GCTGGGGATA AGGTAAAAAA AGGACAACTG GTTGGTCAGA TAATCAGAAA TGATCTGGTT GCTCAAAAGG AACGGGATGC ATTGGGTGTA CTTAAGACTG AAAGTCAGTT AAAGGATCTC AACTCCGGAG CCAGAGTACA GGAGATCAAG GAGGCATCGG CCAATGTAAA CGTTGCCCAA GCTTCTTATG AAAAAGCACT GGCAGATTAT GAAAGGGGGG AGAAGTTATT TCAAGCAGCA GCTCTCCCAC AGGAACAATT AGAAAAGCTT CAGACTGATC TTAGGATTAA AGAAAACCAA CTGGCATCAT TCAGTGCTAA GCTAAGTTTA CTAGAGGAAG GTAACCGTCC AGACGCCATT AAAGCTGCTC AAATAGAAAT GGAGCGTGCA CGGGCAATTT TGAAAGCCTC CGAGGCCCTG TTGGCAGATA CTAAGATATT CTCTCCGGTG AGCGGAATAG TCTTATCCAA AAATCAGGAA CCTGGGGAAT TTGTTCAGGC CGGGGTATCT CTTGTTACGG TGGCGGATCT AAACGATATG TGGATTCGCG TTTATGTACC CACAGATGAC CTACCTAAGC TGAGATTGGG GCAAGAAGTT TATTTTACTG TTAGTGGCAG TAATGATCAT TATGCTGGTC AGATAGAAGA AATAGCTTCT CAGGGTGAAT ACACTCCTAA AACTATACAG ACAAAAAATG AACGCACTAA CATAGTTTAT GCTGTAAAGA TTCGGGTCAC GAAACCCAAC GGAACTTTGA AACCCGGTAT GCCCGCAGAT GTGGTATTTC AACAGCGGGG TGAGTAA
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Protein sequence | MKKRVVAFIL VGLLAGVLYW GYQRFYNPQE SALTASGTIE VTKVELSAKL PGTIGAISVV AGDKVKKGQL VGQIIRNDLV AQKERDALGV LKTESQLKDL NSGARVQEIK EASANVNVAQ ASYEKALADY ERGEKLFQAA ALPQEQLEKL QTDLRIKENQ LASFSAKLSL LEEGNRPDAI KAAQIEMERA RAILKASEAL LADTKIFSPV SGIVLSKNQE PGEFVQAGVS LVTVADLNDM WIRVYVPTDD LPKLRLGQEV YFTVSGSNDH YAGQIEEIAS QGEYTPKTIQ TKNERTNIVY AVKIRVTKPN GTLKPGMPAD VVFQQRGE
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