| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_1578 |
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| Symbol | |
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| ID | 4958367 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | - |
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| Start bp | 1716189 |
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| End bp | 1716911 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640180751 |
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| Product | cell wall hydrolase/autolysin |
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| Protein accession | YP_001112931 |
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| Protein GI | 134299435 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
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| TIGRFAM ID | [TIGR02883] N-acetylmuramoyl-L-alanine amidase CwlD |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.36346 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAACTTC GACTAATCAT GGCGTTAGTG ATGATGTTGC TTTTATATAC AACTCCCGGT
TGGGCGTCAG GAGATGTATT AGGGCGCATA GCCGTAGACC CCGGTCATGG CGGGTACGAC
CCTGGAGCAA CTCGACAAGG TGTAATGGAG AAAGATGTTA ATCTTCAAAT TTCCCAGGAA
ATCGCAAAGT TGCTTAAACA AAATAATGTA GAAGTTGTGT TAACCCGGGA TGGGGATTAT
AACTTGGCTG TGGAGGGACT GCATAAAAAG GAAGCCAAGA GATACGATTT TGATAAACGA
ATAGAGTTGG CCAAAAGGGC TAAAGCTGAT GCAATGGTTA GTATTCATGT GAATATAAGT
CGACGGAAGT GCTCTGGTCC AGAGGCCTTT TATTTTAAAA AATCAGCCCA GGGAAAAATG
CTGGCAGAGA TCATACAGAA AGAACTTTAC CAGATACCCG GTATCAATCA CCGCGCAGTA
AAGACCGGAC GTTATTATTT GATTACTCAT ACCGATATGC CCTGCGTAAT TGTAGAAACT
GGCTTTTTAA ATAATCCTGA AGAACGAGAA AAACTTACAG ATAAAAAGTA TCAGCTAATA
ATGGCTGAAG CTATAACCAA AGGAATTATC AATTACTTAA AAATAAAAGA CCAGCCCCAG
TCAGGAAATA TTAAGGTTCT TGACTACATT AAAAACCTTG TTGCAAATAT TCAAAAGAGG
TGA
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| Protein sequence | MKLRLIMALV MMLLLYTTPG WASGDVLGRI AVDPGHGGYD PGATRQGVME KDVNLQISQE
IAKLLKQNNV EVVLTRDGDY NLAVEGLHKK EAKRYDFDKR IELAKRAKAD AMVSIHVNIS
RRKCSGPEAF YFKKSAQGKM LAEIIQKELY QIPGINHRAV KTGRYYLITH TDMPCVIVET
GFLNNPEERE KLTDKKYQLI MAEAITKGII NYLKIKDQPQ SGNIKVLDYI KNLVANIQKR
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