| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_1562 |
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| Symbol | |
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| ID | 4958199 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | + |
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| Start bp | 1700428 |
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| End bp | 1702098 |
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| Gene Length | 1671 bp |
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| Protein Length | 556 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640180735 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001112915 |
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| Protein GI | 134299419 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.278775 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAAAGTC TATGGAAAAA GGTTAAAACA ATGCCATTCA TTTTAATGGT AATTATGGTG
TTAGTAACAG GCTGTGGTGG CGGTGAAGCA GATAAGGGAG GCTCAAAGGA CTCTGCGTCG
GCAGAAAAAA TCATTAGAGT GAGCGAAGCC AATGTTCCCA AAATAGACCC CGGCGTTGGT
TCTGATTACA GCAGTTCTGT TGCGCTTTGC AACCTATATG ATACTTTGGT GTATCCAAAT
GACGATGGGA CCCTTAAACC AATGTTAGCA ACAAAGTGGG AAACAACCGA CAATGGTCTC
ACCTGGATTT TTGATTTAAG GCAGGGTGTA AAATTTCATA ATGGTGAGGA ATTAACCGCA
GAAGATGTTG TTTTCTCAAT GGAAAGAATG TTGAAAATGG GTGAGGGTTA TGGCTATTTG
TATACGAATG TGATAGCTGA GGCTAAGGCG TTGGACACTT ATAAGGTTCA GTTTAAGTTA
AAGGAAACCT TTGGTCCATT CCTCTCTACT CTGGTTCGCT TGTATGTGCT CGACAAAAGT
CAAGTTATGG CCAATATTAA AACCCCGGGG CCCTATGGAG AAATGGGAGA CTATGGGAAG
GATTGGCTGC TTAACCATGA CGCAGGTAGC GGACCTTTTA AGGTGCAGGA ATTAAAGATG
CAAGAATATT TATCTGCTGA AAGGTTTGAA CAATATTGGG GTGGCTGGGA TAAAGATGCC
CCAGAGGCCT TTAAGATCAT TGGTACAAAT TCTGCCCCCA CGATTCGGAC TCTAATGACT
CGCAAGGAGC TGGAAATTTC AGACCAATGG CAGAGTGAAG AAGCATTAAA AGCATTGGAT
GAAATACCTG GAGTATCCGT AAACTCCGCC TTTATGGGAA GCATGATGAA TATTATGCTT
AACACTAAAA AAGCTCCAAC GGATGATGTG CATTTTCGTA AAGCCCTGGC ATACATCTTG
GATTATCAAA TCATAGAGAA TAAAATATTC CCTGGCAGTA AGAAAGCACT AGGTCCGGTA
CCTTTTAATC TGCCTGGAGC AGCACAGGGG TTACCCCAAT ATAGTCGCAA TTTAGAGAAG
GCAAAACAAG AATTGGAAAA ATCCAAATAT GCAAATAATT TGGAAAAATA TCCGGTAGAG
CTTGCATGGA TTGCTGAAGT ACCGGATGAA GAAAAAATTG CTCTTCTTTT ACAGGCCAAT
GCAGCAGAAT TAGGAATTAA AATTAATATT GTTAAGACAC CCTGGCTTTC TTTTACCGAG
CAGGTAGCTT CCCCAGAAAC CACGGCCAAT GCAAGCATAA TTTTTGTAAG TCCGCATTAT
AACGACGCGG GTTCTGTTAT AGAAACGCGG TATCATTCAA ACTCTGCTGG TACTTGGGAA
CAGTGTGAAT GGTTGAAGGA TACAAATCTT GATATTGCCA TTAAGCAAGC TATCGGAACT
GTGGAGGACT CTCTTCGTGC TTCTAAATAC AAAGCGATTC AAGAATCCAT TGTTGACCTG
TGCCCAACCC TTTGGGTTTT TGACCAAGCA GAAAAACGAG CTTATCAAAG TGATTATATT
CTATGGCCCG CTGCAGAAGC TGGCAAAGCA GGTAAACCTG TGAATACGGT AATGGGCTAT
GCTTTCTATT TTCATGATTT TAAAGTTTAT CCAGAAAAAG TTACAAAATA G
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| Protein sequence | MKSLWKKVKT MPFILMVIMV LVTGCGGGEA DKGGSKDSAS AEKIIRVSEA NVPKIDPGVG
SDYSSSVALC NLYDTLVYPN DDGTLKPMLA TKWETTDNGL TWIFDLRQGV KFHNGEELTA
EDVVFSMERM LKMGEGYGYL YTNVIAEAKA LDTYKVQFKL KETFGPFLST LVRLYVLDKS
QVMANIKTPG PYGEMGDYGK DWLLNHDAGS GPFKVQELKM QEYLSAERFE QYWGGWDKDA
PEAFKIIGTN SAPTIRTLMT RKELEISDQW QSEEALKALD EIPGVSVNSA FMGSMMNIML
NTKKAPTDDV HFRKALAYIL DYQIIENKIF PGSKKALGPV PFNLPGAAQG LPQYSRNLEK
AKQELEKSKY ANNLEKYPVE LAWIAEVPDE EKIALLLQAN AAELGIKINI VKTPWLSFTE
QVASPETTAN ASIIFVSPHY NDAGSVIETR YHSNSAGTWE QCEWLKDTNL DIAIKQAIGT
VEDSLRASKY KAIQESIVDL CPTLWVFDQA EKRAYQSDYI LWPAAEAGKA GKPVNTVMGY
AFYFHDFKVY PEKVTK
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