| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_1560 |
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| Symbol | |
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| ID | 4958192 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | + |
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| Start bp | 1698320 |
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| End bp | 1700074 |
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| Gene Length | 1755 bp |
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| Protein Length | 584 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640180733 |
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| Product | 5-oxoprolinase (ATP-hydrolyzing) |
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| Protein accession | YP_001112913 |
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| Protein GI | 134299417 |
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| COG category | [E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0146] N-methylhydantoinase B/acetone carboxylase, alpha subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0126981 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGACTGAAA GGTTCGTTAA TAACACCGAT CCATTTACAC TGGACATTGT AAAAGATTCA
CTGATAGCCA TTGGTGATGA GATGTTTTAT GCTTTGGCCC GAACCTCCAT GAGTCCCATT
ATATATGAAG TCTTAGATTA TGCCAGTGGA CTAACGGATG CCCAAGGGCA ACTTCTGACA
CAGGGGAACG GTGCCACTGG TTTTATTGGC ATGTTAACCT TTATGGTAAA AGAAACTATC
AATAAGTTTG GCAAAGAAGG CAGCCTAAAA CCCGGCGACA TTATCATTAT TAATGATCCC
TATGGGGGTG GGGGTTCCCA CCTTTCTGAT GTGGGTCTGG TAATGCCCAT ATTCTTCAGG
GGGGAAGTTG TAGCTTTTTC TGCCAACAAA GCACACTGGA CTGAAGTAGG AGGGAAGGAC
CCCGGATCAT GGACAACGGA TTCCACAGAA ATATTTCAGG AAGGACTGCA GTTTCCTTGT
ATTAAGCTTT TTGAGGAAGG GAAGATCAAT CAAGCTCTGG TGGACATGAT TGCAGCCAAT
GTTCGTTTCC CAGATTTATC TCTGGGTGAT ATGTGGGCCC AGGTGGCAGC CCTACGAACC
GGCGAAAGAC GTTTTGTGGA CCTCTGCAAT AAATATGGTA AAGAAATTGT CTTAGCCTCC
ATTGAACATT TATTGGACCA TGGCGAACAG CTTTCCCGGA AACAACTACA ACAATTACCT
AAGGGAAGCT ATGAGGTAGT AGACTATATC GATGATGACG GCTTGGGTCA CGGACCTCTT
AAGGTTCGAG TAAAGGTAAC CATTACAGAC GAAGAATTTA TATGTGATTT TCGAGGTAGT
CATCCCCAGG TTTTGGGTCC GGTAAACTGT TCCTACACAG CCTTGGTTTC TGCGGTAAGA
ATCATTTTTA TGGCTATAAC AAACCCTTCC CAGGATGCCA ATGATGGTAT TTTCCGGCCC
TTAAAAGTGA TTGCAGACAA AGGATCAATC TTTTCAGCCG AAAGACCGGC GGCTGTTTCG
ACCTATTGGG AAACCATGAT CTATGGTGCC GATCTTATTT GGAAAGCCCT GGCACCGGTT
TTACCCCACA GACTAACGGC GGGTCACTTG CTTTCTGTTT GTGCCGTGGT GGTAGCCGGC
ATGCACCCGG ATACCAATGA ACCCTTTCTG GTTGTAGAGC CATCGGTTGG TGGCTGGGGT
GCCGGCGAAG GAAAGGATGG AGAGGCTGGC CAGTTTTGTA TTGGTGATGG TGAGACCTTT
AACGTTCCCA TTGAGGTGGC AGAAACCCGC TATGGCATCA TGGTGGAGGA ATATAGTTTT
CGTGCCGACG GTGCCGGGGC GGGCCGATTC CGGGGTGGTT CCGGTGTTGT GCGCTCCTAC
CGGGCCTTAA CCGACAATCA AACTGTCACA GGGACCTTTG GACGTCACAA GTTTCTTCCC
TGGGGCTTTG ATGGAGGCCA GGATGGTTCT GCTAATTACT TTGAATTTTT AAAGTCAAAT
GGTGAGAAGG AAGGGCCCTT TGGGAAGTAT GCCAGGTATA TTCTGAACAA AGGAGATATA
GTTCGACTGG TTACAGCCAC CGGTGGTGGC TACGGGCACC CTCTAAATAG ATCAATAGAT
AAAGTAGTAG AGGACTTAAA AAATGAATTT ATCACAGTGG GGCAGGCCCG GGATGATTAT
GGTGTTTGCA TAAATCCTAA GACCTTTGAG TTTGAAGGTC TAACCGAAGA ACGTCGGCAG
AAAGAGAGGG CCTAA
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| Protein sequence | MTERFVNNTD PFTLDIVKDS LIAIGDEMFY ALARTSMSPI IYEVLDYASG LTDAQGQLLT
QGNGATGFIG MLTFMVKETI NKFGKEGSLK PGDIIIINDP YGGGGSHLSD VGLVMPIFFR
GEVVAFSANK AHWTEVGGKD PGSWTTDSTE IFQEGLQFPC IKLFEEGKIN QALVDMIAAN
VRFPDLSLGD MWAQVAALRT GERRFVDLCN KYGKEIVLAS IEHLLDHGEQ LSRKQLQQLP
KGSYEVVDYI DDDGLGHGPL KVRVKVTITD EEFICDFRGS HPQVLGPVNC SYTALVSAVR
IIFMAITNPS QDANDGIFRP LKVIADKGSI FSAERPAAVS TYWETMIYGA DLIWKALAPV
LPHRLTAGHL LSVCAVVVAG MHPDTNEPFL VVEPSVGGWG AGEGKDGEAG QFCIGDGETF
NVPIEVAETR YGIMVEEYSF RADGAGAGRF RGGSGVVRSY RALTDNQTVT GTFGRHKFLP
WGFDGGQDGS ANYFEFLKSN GEKEGPFGKY ARYILNKGDI VRLVTATGGG YGHPLNRSID
KVVEDLKNEF ITVGQARDDY GVCINPKTFE FEGLTEERRQ KERA
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