Gene Dred_1548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1548 
Symbol 
ID4957945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp1680977 
End bp1681798 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content48% 
IMG OID640180721 
ProductNitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 
Protein accessionYP_001112901 
Protein GI134299405 
COG category[R] General function prediction only 
COG ID[COG0388] Predicted amidohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGAC CTTTAACCAT TGGTTTAATT CAAATGGATT GCGTACTGGG GGATGTTGCA 
GCCAATGTGG CTAAGGCCAT AGAGAGGATA CGGCAAGCTG CGGCAATGGG AGCACAAATT
ATTTGCCTGC CGGAACTTTG TACCACGGGC TACCGACCAG ACCTGCTAGA GGATAAACTC
TGGGAACTAA CGGAACCAGT ACCTGGTCCC ACCACGGATG TATTTAGCCA GTTAGCTAAG
GAACTGGGAA TATACATTAT TTTGCCCATG AACGAAAAGG GTGCAGTGCC GGGGATGATT
CATAATTCCG CTGTCTTTAT AGATAAAGAT GGAGAAGTAC AGGGCGTGTT CCGTAAGGCC
CATGCCTATG CAACCGAACG CTATTACTTT ACAGACGGCA ACCATTACCC AGTTTTTCAA
ACAGAGTTTG GTAAGGTGGG GGTTATGATC TGTTACGATA TGGGTTTCCC TGAAGTGGCA
AGAATACTGA CCCTGAAGGG GGCCGAAGTG ATTTTTGCTC CTTCGGCCTG GCGTCAGGAG
GATGAAGACA TTTGGGATAT TAACATTGCA GCCCGGGCTC TGGAAAACAG ACTCTTTGTG
GCAGCGGTAA ACAGAGTGGG CAGAGAAGGC GATGTCGTTA TGCATGGCAA AAGCAAGATT
GCCAATACCC GGGGAAAAAC CCTGGCGGAA GCAGCCCGCT TTGAGGAAGA TATTCTTGTG
GCTACGGTGG ACTTGCATGA ACTGATTGCA GGGCGCAGGG AAACCCCCTA TTTGAAGGAT
CGTAAACCTG CCAGTTATGG TTTGATTACG CAAATAAATT AA
 
Protein sequence
MKRPLTIGLI QMDCVLGDVA ANVAKAIERI RQAAAMGAQI ICLPELCTTG YRPDLLEDKL 
WELTEPVPGP TTDVFSQLAK ELGIYIILPM NEKGAVPGMI HNSAVFIDKD GEVQGVFRKA
HAYATERYYF TDGNHYPVFQ TEFGKVGVMI CYDMGFPEVA RILTLKGAEV IFAPSAWRQE
DEDIWDINIA ARALENRLFV AAVNRVGREG DVVMHGKSKI ANTRGKTLAE AARFEEDILV
ATVDLHELIA GRRETPYLKD RKPASYGLIT QIN