Gene Dred_1531 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1531 
Symbol 
ID4955733 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand+ 
Start bp1662928 
End bp1663563 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content38% 
IMG OID640180705 
ProductABC transporter related 
Protein accessionYP_001112885 
Protein GI134299389 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.952965 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACGTTA CGATTAAGGA CTTAAGTTTT AAATATAAAA ATTCTACAGA GGAAATTATC 
CAAAGATTTA ACTTGCAAAT AACTCAAGGA GAAATTATTT CTATTTTAGG TCAGAGTGGC 
AGTGGCAAAA GTACAATCCT CAGGCTGCTT GCGGGATTGG AAAGACCCTG TGCTGGCACC 
ATTGTTATTA ATAATCGGGT AATGGTCGAT AGTACAACCT ATGTTGAACC AGAGGATCGT 
GGCGTCGGGA TGGTGTTTCA AGATTATGCA TTATTCCCTC ATATGACCGT AGAACAAAAT 
ATTAAATATG GCTTGGGCAA ATTGGCTAGA GAAGAACAAG CTAAGCGATT GAAAGAAGTG 
TTAGAACTGG TAAATCTGAA AGATTTGCAA AGTCGTTACC CCTATGAATT AAGTGGTGGA 
CAACAGCAAA GGGTAGCATT AGCCAGAGCC CTGGCACCTA AACCTTCTGT TTTACTAATG 
GATGAACCCT TTAGTAATCT AGATGCAGGA TTAAAATACA CCATTCGAGG GGAATTAAAA 
AATATAATCA AAAAATCAGG CATTACTTCA ATTCTTGTAA CCCATGATCG GGAAGATTCA 
GAAGCTTTAG CCGAGCGGGT TGTACATTTA AAATAA
 
Protein sequence
MYVTIKDLSF KYKNSTEEII QRFNLQITQG EIISILGQSG SGKSTILRLL AGLERPCAGT 
IVINNRVMVD STTYVEPEDR GVGMVFQDYA LFPHMTVEQN IKYGLGKLAR EEQAKRLKEV 
LELVNLKDLQ SRYPYELSGG QQQRVALARA LAPKPSVLLM DEPFSNLDAG LKYTIRGELK 
NIIKKSGITS ILVTHDREDS EALAERVVHL K