| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_1524 |
|---|
| Symbol | |
|---|
| ID | 4955560 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum reducens MI-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009253 |
|---|
| Strand | - |
|---|
| Start bp | 1652842 |
|---|
| End bp | 1653780 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 640180699 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001112879 |
|---|
| Protein GI | 134299383 |
|---|
| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.499904 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGTCGTT ATATTCATCT TTTGTTACTT ACGGTATCCT TTTTCTGGGG AACCTCCTTT
GCAGCAGCCA AAATAGGCTT GCAGGAACTG CACCCACTGA ACCTTGTAAT CTTGCGTTTC
ACCATTGCTT CTGTTATTTT CTACGTACTT TTACAAATAC GCAAGGAACG GGCAATAGAA
GTGAAAGACA TACCCACCTT TATCATTCTA GGTTTTATGG GGATAACATC ATACTTTTAT
ATCCAATTCA CTGGGTTACA ATATACAAAT ACAATCCATT CGGCTTTAAT TATTGCCACC
AGTCCAATCA TGGTGGCAAT AATTGGTGCA GCACTGAAAA TCGAAAAAAT AAGCAGGGCA
ATGTCCTGTG GCATAGCACT GTCCTTTATT GGTGTATCCT TAGTCATTTC CGAGGGAAAT
TGGGCAGGCA TATTTCAGTC CACAACCATA AAAGGGGATT TAATGTTATT ATCCAATGCA
ATTGTTTGGG CTGGGTTTAC TCTGTACGGA AAAAAGATTT TACTTAAATA CAGCCCCTTC
GTGGCCATGG CCTATATTCA TATCTTCGGG ACACTCCTTC TGCTACCCTT GCTGGCAGTT
CCCGATCTAT TAGGGACCCA TTCGTTAATG AAACAGCTTG CAGAATTATC CTGGCCAACC
GTGTCAGCCG CTCTATACCT TGCACTATTT TGCTCGGTTT ATGCATACTT TGTATGGTAT
GCAGGTGTTG AGAAAATTGG TGCCATTCGC ACATCTGTTT TTGCATATTT TAATCCTCTC
TTTGCCACTT TGACAGGTGT GCTGTTATTG AACGAAAAGA TATCTTTTAT CACAATCTTT
GGCGGATGTA TGGTTATGGC AGGTGTTTAT ATAACCAATG AGTTTAAACC AAAGACCGCT
GCAAGGGATA ATAAAAAAGG ACTTAATATA TCGGATTAA
|
|---|
| Protein sequence | MGRYIHLLLL TVSFFWGTSF AAAKIGLQEL HPLNLVILRF TIASVIFYVL LQIRKERAIE
VKDIPTFIIL GFMGITSYFY IQFTGLQYTN TIHSALIIAT SPIMVAIIGA ALKIEKISRA
MSCGIALSFI GVSLVISEGN WAGIFQSTTI KGDLMLLSNA IVWAGFTLYG KKILLKYSPF
VAMAYIHIFG TLLLLPLLAV PDLLGTHSLM KQLAELSWPT VSAALYLALF CSVYAYFVWY
AGVEKIGAIR TSVFAYFNPL FATLTGVLLL NEKISFITIF GGCMVMAGVY ITNEFKPKTA
ARDNKKGLNI SD
|
|---|
| |