Gene Dred_1517 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1517 
Symbol 
ID4955905 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp1646442 
End bp1646936 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content41% 
IMG OID640180692 
ProductTrkA domain-containing protein 
Protein accessionYP_001112872 
Protein GI134299376 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0490] Putative regulatory, ligand-binding protein related to C-terminal domains of K+ channels 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTCTGA TTAAAGAAAC TGATTTGCCG GGAATCGGTA GAAAATTCCA AGTAAATACC 
CGTAGTGGTG ACAAGTTGGT AATCGTTATT CATGATGATG GCCGACGAGA AATTCATCAT
TTTGATTATG ATGATCCAGA AGAAAGCATC TCAATGGTGA CACTGGATGA TAATGAGGCC
CGCCGCGTAA GTGGTATTAT TGGTGGTATG GCCTATCTGC CTAAGGCATT GGAATCCGTG
GAAGTGGCCT TTGATAATAT GGTATTTGAA TGGTATAAGG TAGAGAGTGG CGCGAAAGCC
ATTGGTAAAA CCATCGTAGA ACTGCAAATA CGCAAAAAAA CCGGGGCCAT GATTATTGCA
ATTATTAAAA AGGATGAGAA AATAATTAAT CCAGGTCCCA ATCAAGTAAT TGCGGAAGGG
GCTACGCTAG TGGTCATCGG TGAAAGAAAA CAAGTGAAGG CCTGTAAAGA ACTACTCTTA
AATGGGAGCC TATAG
 
Protein sequence
MSLIKETDLP GIGRKFQVNT RSGDKLVIVI HDDGRREIHH FDYDDPEESI SMVTLDDNEA 
RRVSGIIGGM AYLPKALESV EVAFDNMVFE WYKVESGAKA IGKTIVELQI RKKTGAMIIA
IIKKDEKIIN PGPNQVIAEG ATLVVIGERK QVKACKELLL NGSL