| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_1513 |
|---|
| Symbol | |
|---|
| ID | 4955267 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum reducens MI-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009253 |
|---|
| Strand | + |
|---|
| Start bp | 1643253 |
|---|
| End bp | 1643714 |
|---|
| Gene Length | 462 bp |
|---|
| Protein Length | 153 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 640180688 |
|---|
| Product | CBS domain-containing protein |
|---|
| Protein accession | YP_001112868 |
|---|
| Protein GI | 134299372 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2239] Mg/Co/Ni transporter MgtE (contains CBS domain) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCTCCA TTCGTGAAGT CATGGTACCT ATTGCTGAGT ATTCGGTGGT AATGGAACAT
ATGCCGGTGA AAAAAGCCAT TGAAGTATTA AAAAAGTCCT TTCATAGGGA TGAAAATGGT
GGTATTGTGG GCCACCGCTC TCTGTTGGTA ACGAATAAAA AGGGTGAACT GGTCGGTATT
GTCACGCTTC GCAATATTTT GAAGGCAGTC TTAACAAAGT ATGATCTACC AGACAATTAC
CTTTGGATTT ACTCCGTAAA GGATTCTGGG CCCAATATGC CGGTAAAAGG TGTCATGAGG
TCTACCAAAA TTGCTTTTGT AGATATTGAA GATGACTGGT ACAGGGTTAT TGATATTTTT
TTAACTAAGA AAGTAAATTC ATTACCCGTA GTTGAAAAGG GTAAACTGGT TGGGGTTATC
CGGACCATAG ATGTATTTGG TATTCTAGGT ATATTGTTGT AG
|
|---|
| Protein sequence | MISIREVMVP IAEYSVVMEH MPVKKAIEVL KKSFHRDENG GIVGHRSLLV TNKKGELVGI
VTLRNILKAV LTKYDLPDNY LWIYSVKDSG PNMPVKGVMR STKIAFVDIE DDWYRVIDIF
LTKKVNSLPV VEKGKLVGVI RTIDVFGILG ILL
|
|---|
| |