Gene Dred_1511 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1511 
Symbol 
ID4957877 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp1639691 
End bp1641418 
Gene Length1728 bp 
Protein Length575 aa 
Translation table11 
GC content41% 
IMG OID640180686 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_001112866 
Protein GI134299370 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCAACACC TCTTGAGTAT TTTTCTAAAG TTTGTTTTAT CTGATTATAC GCTTATTGCT 
TTTATTTTTG CAATATATCG TGTTTTTTCG TTTTTGTATC TTTTCCTACA CCTACTTGTA
GTATATAATT CACATAAAGA AAAATATCCA AAAGGGAGGT CGATTTTACT GAATAATAAA
AATATTTTTC CTTTCTTTAA ACAAAATAGT CTAACTAATC AGATAGTAAC TATTATTGCA
GTGATTATGC TTGTACCTAT TGTAGCATTG ATGTATGACG TATTCTTCGC CTCCCAAACA
GATAAGGTAA TATTTCTAGA GAAAGAGCAG CGATTAAAAG CTCTGGTTAA GAGTACTAAC
CAAAGTTTTA TGAAAAACCT TGAGTCTCTA AGAATAACTC CCGAGAATAT CTCCTCAACC
ACACTGCATA ATGAATTTAC ACGGGTGGTA GAGCCGCACC TGCCTGCTAA TTCTGGCATC
CGCTTCGGTC TCTATGTACC TCAAACAGAA AAAATCAAAG TACTGGGTTT CCTGCATAAC
TATCGTAATC TCTCCCCTGA AGAGGAAGCC CAGCGGGAAA AAATTATTTT CGCCAATACT
AAGCCTCGCT TGGTGGCAAC TGAAATGAGC AAGGAGCCCA ATTTTTACAT TTCCGGTTCC
TGGGATGACC AAGTTGTTGA GTACATTTCC CCTGTGATAT TGCAAGGAAA AGTGGTAGCA
GTTATGTGGG CAGGCGAACG TTTAAACCCC TTCTTCTACC AAAGCAATTA TGCTCGGAAA
TTCCTTCGTT ACTTTACTTT AGCAGTGTTG GCCATGGTCA TGTTTGCAAC CCTTTTAACA
ATCCGCAATA TTACAACCGG TGTTGATCGT TTAAAAAAGG GGTTACATCG CATGGAACAC
GATATTCACC ACCTACTGCC CGAGATGTCC GGCGAACTGG GCCAGGTAGC CCAGGCAGTT
AACCGTATGG CCCTTGGCTT GTTGGAAAAG GAACGACTGG AAGACCAACT GCGTCAGTCG
GAGCACCTTA TTGCACTTGG CCGTCTGGCA ACGGGCGTAG CTCACGAGTT GCGAAACCCC
ATCGGTATTA TTAAAACCCT GGTGGAACTA ATGAAAGATG AGTACTCTCA GGTTAGTGGT
ATCGATGAAT TTACCAAAGC AGTTGACGAA CAAGTGGATC GCCAAAACAT GGTGATTCAA
GAACTTCTAG ATTTTGGCCG TCCAACAAAG GTATCTATTA AGGAATGTTC TGTTAATGAC
CTTCTAAAGG GTGTACTATC CTTCTCTGCT GCGATGTTGC GAAAAGAAAA TGTAACGGTT
CACTTGCATT TGGATGAAAG TCTGCCTAAA ATCATGGCGG ATACTGAAAA ACTTAAACAG
GTATTTGTTA ATCTTATTGT TAATGCTGCG GAGGCCATGC CATCCGGTGG AACATTGGAT
ATTAAAACAG AGCAAAGTGA AAACTTGGTG ACAGTCACCT TCTCGGACAC GGGTGAAGGT
ATTGACTTAG AAGAAAAGTC TAAGATTTTT GATCCCTTTT ACACGACCAA AAAGGCTGGC
ACTGGGCTTG GGCTTTCTAT TTCTTACCAA AACATTAAGC TACATGAAGG AACCATTGAA
GTGTCTAGTA CCCGGAACAA AGGAACCACA TTTACCATTC GGTTGCCAAG GAAAAAACAT
ATCTCCGAGA GGAGGGATTG TCTTGATACC ACGAATTCTG GTCATTGA
 
Protein sequence
MQHLLSIFLK FVLSDYTLIA FIFAIYRVFS FLYLFLHLLV VYNSHKEKYP KGRSILLNNK 
NIFPFFKQNS LTNQIVTIIA VIMLVPIVAL MYDVFFASQT DKVIFLEKEQ RLKALVKSTN
QSFMKNLESL RITPENISST TLHNEFTRVV EPHLPANSGI RFGLYVPQTE KIKVLGFLHN
YRNLSPEEEA QREKIIFANT KPRLVATEMS KEPNFYISGS WDDQVVEYIS PVILQGKVVA
VMWAGERLNP FFYQSNYARK FLRYFTLAVL AMVMFATLLT IRNITTGVDR LKKGLHRMEH
DIHHLLPEMS GELGQVAQAV NRMALGLLEK ERLEDQLRQS EHLIALGRLA TGVAHELRNP
IGIIKTLVEL MKDEYSQVSG IDEFTKAVDE QVDRQNMVIQ ELLDFGRPTK VSIKECSVND
LLKGVLSFSA AMLRKENVTV HLHLDESLPK IMADTEKLKQ VFVNLIVNAA EAMPSGGTLD
IKTEQSENLV TVTFSDTGEG IDLEEKSKIF DPFYTTKKAG TGLGLSISYQ NIKLHEGTIE
VSSTRNKGTT FTIRLPRKKH ISERRDCLDT TNSGH