Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_1494 |
Symbol | |
ID | 4957644 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | - |
Start bp | 1617261 |
End bp | 1618673 |
Gene Length | 1413 bp |
Protein Length | 470 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 640180669 |
Product | sigma-54 dependent trancsriptional regulator |
Protein accession | YP_001112849 |
Protein GI | 134299353 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGAAATTC ATAAGTCAAG AGACCACCAA ATAATAGAAC AAGAATTGAA CGAAAATCAA GTCTTAGCCT CTATGTGGGA TGTACTTATC GAAAATCCTT ATGAAGGTAT GATTGTTGTA AACGCACAGG GGTATATTAT CTTTATTAAT AATACCTATC TAAATATTTT AGGTCTCAAA AAAAGTGATG CTATAGGAAA ACATGTTTGG GATGTTACCA GCCATTCTCA ATTACCCCAG GTGATTGAGA CAGGCCGCCC CATTTTATAT GATTTCTGGG AAGTCAATGG TCGTAAACTA ATTGTTGTAC GTATTCCCAT TATTAACAAC GAAGGCAACG TTATTGGAGC CATCGGGAAA TCTCTCTTTA CCGATATACC TTCAGGAAAA CTGCTATTTA CTAAACTGCA GGTATTGGAA AAGGAGTTAG CTTTTTACAA AGAAGAAATA CGCAAGGTTT ATAAGGCTAA ATACTCTTGT AAAAATCTAA TTGGAGAAAG CGAGTCAGTT AAGGAAATAA AAAAACTTGC CCGCAAGGTG GCCTCTTCTA ACTCCACCAT TCTGATTACC GGCGAAAGCG GTACAGGCAA GGAACTACTT GCCCAGGCCA TACATAACGC CGGTTGCCGA AACCAAAGGC CCTTCGTTCG GGTAAATTGT GCTGCTGTAC CAGAAAATCT ACTTGAGACA GAACTTTTTG GCTACGATGA CGGAGCCTTC ACCGGGGCCA AAAAAGGTGG TAAACCTGGT AAATTTGAAT TAGCCCAAGG AGGTACCATT TTCTTGGATG AAATTGGGGA AATACCTCTC ACTATGCAGT CAAAACTTTT GGCCGTTCTA CAGGAAAGGG AATTGGAGCG TGTAGGGGGA ATTAAGACTG TTCCTTTAGA TGTACGGGTT ATTTCAGCCA CCAACCGAAA CCTTGAGGAT ATGGTTAAAA ATGGTACTTT TCGGGAGGAT CTTTATTATC GTTTAAATGT AATAAACTTT CGATTACCTT CACTGCGAGA ACGTTCAGAG GATATTCCTC TGTTAGTTAA TTATTTGACT CATAAACTAA ATAAAAAGTT AAATTGTCAT GTGGAAGGGT ACACAGAGCA AGCTATGCAA CTGCTAACAA AATATCATTG GCCTGGAAAT GTAAGACAGT TGGAAAATGC TTTAGAAAGA ATGTTTAGTT TTACAGATGA TAAGATCTTA TCCACAGAGC ATATGCCTTT TCTCAAAAAA ATTGTTAATG TTAATTCTAG TGAAGTTAAT ACAAAATCTT TAGCCGAGAC CATTGCTGAA ACCGAGAAGA AAATGATTTT GGATGCCTTG CAAAAGGTTG ATGGCAATCG AAATAAGGCT GCGAAGCTTC TGGATATACA TCTTTCGGTT TTATACAGAA AAATAAAAAA ATATGATATT TAA
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Protein sequence | MEIHKSRDHQ IIEQELNENQ VLASMWDVLI ENPYEGMIVV NAQGYIIFIN NTYLNILGLK KSDAIGKHVW DVTSHSQLPQ VIETGRPILY DFWEVNGRKL IVVRIPIINN EGNVIGAIGK SLFTDIPSGK LLFTKLQVLE KELAFYKEEI RKVYKAKYSC KNLIGESESV KEIKKLARKV ASSNSTILIT GESGTGKELL AQAIHNAGCR NQRPFVRVNC AAVPENLLET ELFGYDDGAF TGAKKGGKPG KFELAQGGTI FLDEIGEIPL TMQSKLLAVL QERELERVGG IKTVPLDVRV ISATNRNLED MVKNGTFRED LYYRLNVINF RLPSLRERSE DIPLLVNYLT HKLNKKLNCH VEGYTEQAMQ LLTKYHWPGN VRQLENALER MFSFTDDKIL STEHMPFLKK IVNVNSSEVN TKSLAETIAE TEKKMILDAL QKVDGNRNKA AKLLDIHLSV LYRKIKKYDI
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