Gene Dred_1494 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1494 
Symbol 
ID4957644 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp1617261 
End bp1618673 
Gene Length1413 bp 
Protein Length470 aa 
Translation table11 
GC content38% 
IMG OID640180669 
Productsigma-54 dependent trancsriptional regulator 
Protein accessionYP_001112849 
Protein GI134299353 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGAAATTC ATAAGTCAAG AGACCACCAA ATAATAGAAC AAGAATTGAA CGAAAATCAA 
GTCTTAGCCT CTATGTGGGA TGTACTTATC GAAAATCCTT ATGAAGGTAT GATTGTTGTA
AACGCACAGG GGTATATTAT CTTTATTAAT AATACCTATC TAAATATTTT AGGTCTCAAA
AAAAGTGATG CTATAGGAAA ACATGTTTGG GATGTTACCA GCCATTCTCA ATTACCCCAG
GTGATTGAGA CAGGCCGCCC CATTTTATAT GATTTCTGGG AAGTCAATGG TCGTAAACTA
ATTGTTGTAC GTATTCCCAT TATTAACAAC GAAGGCAACG TTATTGGAGC CATCGGGAAA
TCTCTCTTTA CCGATATACC TTCAGGAAAA CTGCTATTTA CTAAACTGCA GGTATTGGAA
AAGGAGTTAG CTTTTTACAA AGAAGAAATA CGCAAGGTTT ATAAGGCTAA ATACTCTTGT
AAAAATCTAA TTGGAGAAAG CGAGTCAGTT AAGGAAATAA AAAAACTTGC CCGCAAGGTG
GCCTCTTCTA ACTCCACCAT TCTGATTACC GGCGAAAGCG GTACAGGCAA GGAACTACTT
GCCCAGGCCA TACATAACGC CGGTTGCCGA AACCAAAGGC CCTTCGTTCG GGTAAATTGT
GCTGCTGTAC CAGAAAATCT ACTTGAGACA GAACTTTTTG GCTACGATGA CGGAGCCTTC
ACCGGGGCCA AAAAAGGTGG TAAACCTGGT AAATTTGAAT TAGCCCAAGG AGGTACCATT
TTCTTGGATG AAATTGGGGA AATACCTCTC ACTATGCAGT CAAAACTTTT GGCCGTTCTA
CAGGAAAGGG AATTGGAGCG TGTAGGGGGA ATTAAGACTG TTCCTTTAGA TGTACGGGTT
ATTTCAGCCA CCAACCGAAA CCTTGAGGAT ATGGTTAAAA ATGGTACTTT TCGGGAGGAT
CTTTATTATC GTTTAAATGT AATAAACTTT CGATTACCTT CACTGCGAGA ACGTTCAGAG
GATATTCCTC TGTTAGTTAA TTATTTGACT CATAAACTAA ATAAAAAGTT AAATTGTCAT
GTGGAAGGGT ACACAGAGCA AGCTATGCAA CTGCTAACAA AATATCATTG GCCTGGAAAT
GTAAGACAGT TGGAAAATGC TTTAGAAAGA ATGTTTAGTT TTACAGATGA TAAGATCTTA
TCCACAGAGC ATATGCCTTT TCTCAAAAAA ATTGTTAATG TTAATTCTAG TGAAGTTAAT
ACAAAATCTT TAGCCGAGAC CATTGCTGAA ACCGAGAAGA AAATGATTTT GGATGCCTTG
CAAAAGGTTG ATGGCAATCG AAATAAGGCT GCGAAGCTTC TGGATATACA TCTTTCGGTT
TTATACAGAA AAATAAAAAA ATATGATATT TAA
 
Protein sequence
MEIHKSRDHQ IIEQELNENQ VLASMWDVLI ENPYEGMIVV NAQGYIIFIN NTYLNILGLK 
KSDAIGKHVW DVTSHSQLPQ VIETGRPILY DFWEVNGRKL IVVRIPIINN EGNVIGAIGK
SLFTDIPSGK LLFTKLQVLE KELAFYKEEI RKVYKAKYSC KNLIGESESV KEIKKLARKV
ASSNSTILIT GESGTGKELL AQAIHNAGCR NQRPFVRVNC AAVPENLLET ELFGYDDGAF
TGAKKGGKPG KFELAQGGTI FLDEIGEIPL TMQSKLLAVL QERELERVGG IKTVPLDVRV
ISATNRNLED MVKNGTFRED LYYRLNVINF RLPSLRERSE DIPLLVNYLT HKLNKKLNCH
VEGYTEQAMQ LLTKYHWPGN VRQLENALER MFSFTDDKIL STEHMPFLKK IVNVNSSEVN
TKSLAETIAE TEKKMILDAL QKVDGNRNKA AKLLDIHLSV LYRKIKKYDI