| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_1485 |
|---|
| Symbol | |
|---|
| ID | 4957565 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum reducens MI-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009253 |
|---|
| Strand | + |
|---|
| Start bp | 1607654 |
|---|
| End bp | 1609267 |
|---|
| Gene Length | 1614 bp |
|---|
| Protein Length | 537 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 640180660 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001112840 |
|---|
| Protein GI | 134299344 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTTAGTA CAAATGGATT ATCACTACGT TTCGGAAAAC GTGCCTTATT TGAGGATGTC
AATATAAAAT TCACACCTGG CAACTGTTAT GGCCTTATAG GCGCCAACGG GGCAGGCAAA
TCCACTTTTT TAAAAATTCT AGCAGGTGAA ATTGAACCAA GTGCCGGGGA GGTTATTATT
ACACCGGGTG AACGATTAGC GGTTTTAAAA CAGGACCACT TTGAGTTTGA TGAATTTGAA
GTTCTCAAAG TTGTTATTAT GGGACACGAA AGACTCTATG CCATCATGGA AGAAAAGGAT
GCACTTTATG CTAAAGCTGA TTTCTCTGAG CAAGATGGAA TTAGAGCTTC TGAGTTGGAG
TGTGATTTTG CCGAACTCAA TGGCTGGGAA GCAGAGTCCG AAGCGGCTCG CTTATTAAAC
GGCCTTGGTG TTAGTGAAGA ACTTCATAGT AAACAAATGA AAGAATTGGG TGGTGTAGAA
AAGTTAAAGG TTTTACTGGC CAGGGCACTC TTTGGTAACC CAGATATCCT ATTACTGGAC
GAGCCTACCA ACCACCTGGA TGTTGAGGCA ATCACATGGT TGGAAGAGTT CCTATATAAT
TTCCAAAATA CCGTTATCGT GGTATCCCAC GATCGCCACT TTTTAAATAA AGTTTGCACC
CATATCGCGG ATATTGACTT TGGCAATATC CAATTATATG TGGGCAATTA TGACTTTTGG
TTAGAGTCCA GCCAACTGGC ATTACAATTG GCCAAAGATG CCAACAAGAA AAAGGAAGAG
AAGATAAAGG AACTACAAAG ATTTATTGAA CGTTTCAGTT CCAATGCCTC AAAGGCTAAA
CAAGCAACTT CAAGGAAAAG ACAACTGGAT AAATTGACCC TAGAAGATAT TAAGCCCTCT
TCCCGGAAAT ATCCTTTTAT TGAGTTTAAA CCGGATCGGG AAGCAGGTAA GCAGTTACTG
GAGGTCCAAA ATTTAACTTT TGAAGCTAAT GGAGAAGTGA TTTTAAAAGA TATCAGTTTT
ACGGTAAATA AAGGGGACAA GATTGCCTTT GTTGGACCGG ATGGTCTGGC AAAAACCACC
CTGTTTAAAA TTTTAATGGG TGAACTGTCT GCAAAGGATG AAAATAGTTT TAAATGGGGA
GTTTCTACTT CCCAGGCCTA TTTTCCGAAA GACAACTCGG ACTACTTTAA TGTAGACTTA
AACTTGGTGG ATTGGTTGCG TCAGTATTCC AGAGACCAAG AGGAATCCTA TGTAAGGGGG
TTTCTGGGAA GAATGCTCTT TTCTGGTGAG GAAACACAAA AAAGTTCAAA GGTACTTTCC
GGGGGAGAAA AGGTACGCTG CATGCTATCT AGAATGATGC TAAGTGGTGC CAATGTCTTA
CTTTTTGATG AACCAACCAA CCACCTGGAT CTAGAATCCA TTACTGCCCT TAATAACGGA
TTGATGAAAT TTGATGGAAC CATTTTATTT GTATCCCAGG ACCATCAATT TATTCAAACT
ATTGCAAATC GGATTATTGA AATAACACCC AAGGGTCTCA TTGATAGACA GATGACCTAT
GATGAGTACT TGGCCAACGA AGATGTTAAG AATCTCCGCT TGGCGCTTTA TTAA
|
|---|
| Protein sequence | MLSTNGLSLR FGKRALFEDV NIKFTPGNCY GLIGANGAGK STFLKILAGE IEPSAGEVII
TPGERLAVLK QDHFEFDEFE VLKVVIMGHE RLYAIMEEKD ALYAKADFSE QDGIRASELE
CDFAELNGWE AESEAARLLN GLGVSEELHS KQMKELGGVE KLKVLLARAL FGNPDILLLD
EPTNHLDVEA ITWLEEFLYN FQNTVIVVSH DRHFLNKVCT HIADIDFGNI QLYVGNYDFW
LESSQLALQL AKDANKKKEE KIKELQRFIE RFSSNASKAK QATSRKRQLD KLTLEDIKPS
SRKYPFIEFK PDREAGKQLL EVQNLTFEAN GEVILKDISF TVNKGDKIAF VGPDGLAKTT
LFKILMGELS AKDENSFKWG VSTSQAYFPK DNSDYFNVDL NLVDWLRQYS RDQEESYVRG
FLGRMLFSGE ETQKSSKVLS GGEKVRCMLS RMMLSGANVL LFDEPTNHLD LESITALNNG
LMKFDGTILF VSQDHQFIQT IANRIIEITP KGLIDRQMTY DEYLANEDVK NLRLALY
|
|---|
| |