Gene Dred_1469 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1469 
Symbol 
ID4957247 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand+ 
Start bp1595420 
End bp1596100 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content35% 
IMG OID640180644 
Producthypothetical protein 
Protein accessionYP_001112824 
Protein GI134299328 
COG category[S] Function unknown 
COG ID[COG2323] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTCTTG TTATGATACG AACTTTAATT TTATTTACTC TGGTGGTTCT AGCCCTGCGA 
ATTATGGGCA AGCGACAGAT TGGTAAACTT CAACCCTATG AACTGGTTAT TATCATTATG 
CTGGCCGAAT TGGCTTCCAT TCCAATGGCT GATAACAGGT TTCCGCTGGT AAGCGGGGTT 
GTTGCTATCA TAACGCTGCT ATTTGTGGAA ATTTTAATCT CTTATACCTC TTTAAAAAGT 
GAACGTTTAC GGGAATTTGT TTGCGGTACA CCAAGTATTT TAATTGAAAA TGGTAAAATC 
GTTGAGCAAG AACTAAAAAG ATTGCGATAT AACATTAATG ATTTACTGGA GCAACTAAGA 
TCTAAAAATT TTCCCGACAT TACGGATGTA GAATTTGCTG TTTTAGAAAC CAGTGGAGAG 
ATTAGTGTGA TACCCAAATC ACAGAAAAGG GCTGTCAGTC CAGAAGATCT AAATATTCCT 
ACGGAATACG AAGGGCTTCC CATAACATTA ATTATAGATG GGTTTGTTTT TGAAAAAAAT 
TTATCCAAGT TTAATCTTTC TAAAGAGTGG CTAAAAGACG AGTTTAGTAA ATTTGGTATT 
TATGATTCTA AGCAGGTATT GTTTGCCAGC CTGGACACAA AAGGAAATTT ATTTTATCAA 
CTTAAAAATA AAATGGCATA A
 
Protein sequence
MILVMIRTLI LFTLVVLALR IMGKRQIGKL QPYELVIIIM LAELASIPMA DNRFPLVSGV 
VAIITLLFVE ILISYTSLKS ERLREFVCGT PSILIENGKI VEQELKRLRY NINDLLEQLR 
SKNFPDITDV EFAVLETSGE ISVIPKSQKR AVSPEDLNIP TEYEGLPITL IIDGFVFEKN 
LSKFNLSKEW LKDEFSKFGI YDSKQVLFAS LDTKGNLFYQ LKNKMA