Gene Dred_1466 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1466 
Symbol 
ID4957087 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp1593862 
End bp1594722 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content43% 
IMG OID640180641 
Producthypothetical protein 
Protein accessionYP_001112821 
Protein GI134299325 
COG category[S] Function unknown 
COG ID[COG2323] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGGATT GGATTACAGT AGGACTTCGC TCCCTGGGGG TCTTTGCCTT AACATTACTA 
GCCGTACGAA TAATAGGAAA AAAACAAACG TCGCATCTTA CCTTCTTTGA TCTCATAACC
GCCATCGTGA TTGGTGTTCT CGCAGCTATC ATCTCCCTTA ATCTTACCGG GGGCTTGAAA
AATGGTTTAA GTGCCCTGGC TGTATGGACA TTGCTACCAA TTTTACTTTA TTGGCTGTCC
CTGAAATACA AAACCCTGCG AGATATTCTG CAAGGAAAAG AAACCATGCT GATTAACCAT
GGTAAGGTAT TAGAGGATAA GCTGAAAGAT GCCCGTCTTA CCCCTGAAGA TTTGCTAAGT
CATCTGCGTA GAAATAATGC TTTTCGAGTA GCTGATGTAG AATTTGCCAT GTTAGAGCCA
AATGGAGATG TCAGTGTATT CCTTAAAAAG GGCAACCAAC CTCTATCTGC CTCCACCATA
GATCTGCAAG TAAACCACGA AAGCGTACCC CAGACCGTTA TGCTGGACGG TGTTATCATG
GACGAACCCC TCACATCAAT GGGTCTTAAT AGGAACTGGC TGCATACGGA ACTTGAGAAG
TCGGGGGTGG CACCGGAAAA TGTGTTCATT GCCCAAGTAG ATTCCCTTGG ACAGCTTTAT
CTTGATCTAT TTGATGATGC CGTTCAAGTA CCACAACCAA AAACCAAAGA CCTTGTCTAT
GCTACCTTAA AGAAATGCCA GGCTGATTGT GAAATGTATG CGCTAGCCAC TAAAAAAAAC
AGCGTAAAAA AAATGTATGG TCAATGTGCC GAGGAGTTGG AGCAAATAGT TACAGATCTG
AAACCTTTGC TTAAAAGGTA A
 
Protein sequence
MPDWITVGLR SLGVFALTLL AVRIIGKKQT SHLTFFDLIT AIVIGVLAAI ISLNLTGGLK 
NGLSALAVWT LLPILLYWLS LKYKTLRDIL QGKETMLINH GKVLEDKLKD ARLTPEDLLS
HLRRNNAFRV ADVEFAMLEP NGDVSVFLKK GNQPLSASTI DLQVNHESVP QTVMLDGVIM
DEPLTSMGLN RNWLHTELEK SGVAPENVFI AQVDSLGQLY LDLFDDAVQV PQPKTKDLVY
ATLKKCQADC EMYALATKKN SVKKMYGQCA EELEQIVTDL KPLLKR