| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_1458 |
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| Symbol | |
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| ID | 4957159 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | + |
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| Start bp | 1585205 |
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| End bp | 1587160 |
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| Gene Length | 1956 bp |
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| Protein Length | 651 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640180633 |
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| Product | alpha amylase, catalytic region |
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| Protein accession | YP_001112813 |
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| Protein GI | 134299317 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAATGTTT GGATCTATCA TAACTCACAT GAAGTTTATT ACCGCAACCC TTTCGGGGCT
GTGTCATGCG ATGAAAGGGT AATATTATCT TTAACAATAG AAATTGAAGA GGAAGCGCAT
AGCATATTTT TGCGTCTGTG GAAGCATGGA CGTGAAGAGG AAAAAATACC AATGCGATTG
CGGGAAGGAC ATGGAAATAA AAAGACTTAT CAGGTTGAAA TAAATGTTCC CTCTGTACAG
GGATTACTAT GGTATTATTT TATCATTGGT ATAAAAGATA AGACTTATTA CTATGGCAAT
AATTATGATC AACTGGGTGG CATAGGGGAA ATCTATGAAC ACGAACCGCC ATCCTACCAG
ATTACAGTCT ATAAGAGGAA CCTTGTAACT CCTAACTGGT TTAAGGATGC AGTGATGTAC
CAAATCTTTG TTGACCGATT TTGCAATGGT TATGAGGCGG GGCAAGTATT AAACCCGAAA
GAGCATTGTA TAATTTACCC CCATTGGGAT GCAACACCTC AGTATGGGAA ATGCCCTGAA
ACCGGAAAAA CGGTTTGTTA TGATTTTTTT GGTGGAAATC TACTGGGGGT TATAAAAAAA
CTACCTTACT TAAAAGAGCT GGGTATTCGA GTAATATATT TCAATCCCAT CTTTGAGGCA
GCCAGCAATC ATAAATACGA TACCGGAGAC TACAAAAAGA TTGATCCCAT GTTTGGAGAC
CACGGGGTTT TTCAAGAGTT ATGTAAGAAG GCACAGGAGA TGGGTATTTC TATTATTCTG
GATGGGGTTT TTAGTCATAC CGGGAGCAAT AGCCGCTACT TTAACAGGGA TGGTCAATAT
CCATCCCTGG GAGCTTATCA ATCCAAGGAT TCACCCTATT ACTCATGGTA TAGATTTACA
CATTTTCCCA ATGAATACGA CTGCTGGTGG GGGATTGATA CACTTCCCAA TGTTAATGAA
CTGGACCCTT CTTATCAAGA GTATATCATT ACCGGGGAAG ATAGTGTTAT TAAGCATTGG
ATGAGAATGG GGGCAAAGGG TTGGCGCTTG GATGTGGTAG ATGAATTACC ACCGGAATTT
ATAAAAAAGA TTCGTTCAGT CATGAAACAT CTGGACCCTG AATCAATTTT AATTGGTGAA
GTGTGGGAAG ATGCCACCAA CAAGGTCAGT TACGGCCAGA TGCGAGAATA CCTCCTAGGA
GAAGAATTGG ATTCCGTGAT GAACTATCCC TTCCGGAATA TATGGCTAGA ATATTTATTG
GGGAAAAGAG ATGCCCGTAG CACTCACCTA CGGCTAATGA ACTTATTCGA AAATTACCCA
TTACACCATT TCTATTCCAC CATGAATTTA ATTAGCAGCC ATGATGTATC AAGGGCCTTA
ACCGTTCTCA GTGATGCACC GCCTGAAGAT ATGCTGTCTA GGGAAGAGCA GGCCAAGGTT
CAATTAAGTG AAATCCAACT AGAACGGGGC CTTGCCCGCT TAAAGCTGCT TTCCTTGCTG
CAAATGACCT TTCCCGGTGT TCCTTGTATC TACTATGGGG ACGAAGTTGG GATGCATGGT
TATAGAGATC CATTGAACAG AGGAACCTAC CCCTGGGGCA AAGAAAACAG TGATTTATTG
GCCTGGTACA AAAAGCTTAT CGCATTAAGA AATGAATATG AGGTCCTGCG AACCGGGCTG
TGGCGGCCGA TTTACATGCA AGGTCAAATT TATGGTTATT TAAGGGTTAT TAAACAGGGG
AAGGATGTCT TTAACCGGCC AGCCAAAAAT CATGTTGCTC TTGTTTTAGT GAACCCCGGC
AGAGAAAGTG CAGTAGAGGT ATCCATTCCT TTAAAAAACT GGTGCAATGG TACCATGATG
GACCTATTGC AGGTTGATAA GACCTATAAA ATTGAGAATG GTTTATTACA TGTGAAACTG
GAACCACTTC AGGGAACTTT ATTAATAGAC AGGTGA
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| Protein sequence | MNVWIYHNSH EVYYRNPFGA VSCDERVILS LTIEIEEEAH SIFLRLWKHG REEEKIPMRL
REGHGNKKTY QVEINVPSVQ GLLWYYFIIG IKDKTYYYGN NYDQLGGIGE IYEHEPPSYQ
ITVYKRNLVT PNWFKDAVMY QIFVDRFCNG YEAGQVLNPK EHCIIYPHWD ATPQYGKCPE
TGKTVCYDFF GGNLLGVIKK LPYLKELGIR VIYFNPIFEA ASNHKYDTGD YKKIDPMFGD
HGVFQELCKK AQEMGISIIL DGVFSHTGSN SRYFNRDGQY PSLGAYQSKD SPYYSWYRFT
HFPNEYDCWW GIDTLPNVNE LDPSYQEYII TGEDSVIKHW MRMGAKGWRL DVVDELPPEF
IKKIRSVMKH LDPESILIGE VWEDATNKVS YGQMREYLLG EELDSVMNYP FRNIWLEYLL
GKRDARSTHL RLMNLFENYP LHHFYSTMNL ISSHDVSRAL TVLSDAPPED MLSREEQAKV
QLSEIQLERG LARLKLLSLL QMTFPGVPCI YYGDEVGMHG YRDPLNRGTY PWGKENSDLL
AWYKKLIALR NEYEVLRTGL WRPIYMQGQI YGYLRVIKQG KDVFNRPAKN HVALVLVNPG
RESAVEVSIP LKNWCNGTMM DLLQVDKTYK IENGLLHVKL EPLQGTLLID R
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