Gene Dred_1453 details

Gene Information

• Locus tag: Dred_1453
• ID: 4957064
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfotomaculum reducens MI-1
• Kingdom: Bacteria
• Replicon accession: NC_009253
• Strand: +
• Start bp: 1577306
• End bp: 1579186
• Gene Length: 1881 bp
• Protein Length: 626 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 640180628
• Product: 1,4-alpha-glucan branching enzyme
• Protein accession: YP_001112808
• Protein GI: 134299312
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0296] 1,4-alpha-glucan branching enzyme
• TIGRFAM ID: [TIGR01515] alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAATCTT TTCCTGGTGA AATTGACCGA TTTTTGTTTC ATGAAGGATC CCATGTTAGA 
AGTTATAAAA TATTTGGGGC CCATTCTGCA ATACAAGACG GACTAGCAGG TGTTCGATTT 
ACATTATGGG CTCCCAATGC AGCCGATGTT CGACTCGTTG GGGATTTCAA TGAATGGCAG 
GGTCATTTGC ACAGAATGAA GAGAGTGAAG GATAGTCCCA TATGGAGTCT TTTTATTCCG 
GGGTTACCAG AGAATTCTCT GTATAAATAC GAAATTTATA CTCATCAGGG AGAAGTGTTG 
TTAAAGGCGG ATCCCTATGC TTTTTTCTCA GAAATGAGGC CAGCTACTGC GTCTCGGGTT 
TTTAACATAG AAGATTATCA ATGGCAAGAC CAGGCTTATC AGGAACAAAA AAAGCAGCAA 
TCCATGTATA AACAACCAGT AAATATCTAT GAAGTGCACC TAGGATCTTG GAGAAGAAAA 
AAGGATGTTT TTTTAAATTA TCAAGAATTA GCAAATCAAT TAATTGATTA TGTTATAGAT 
ATGGGATATA CCCATATAGA ACTTTTGCCG GTGATGGAAT GCCCCCTGGA TGCATCCTGG 
GGGTACCAGC TTACCGGATA TTATGCGGTT ACTAGTCGTT ATGGCACTCC CTTTGATTTT 
ATGTATTTTG TGGATCAGTG CCATCAAAGG GGTATTGGGG TTATCTTAGA TTGGGTACCG 
GCCCACTTTT GTAAAGACGG GCATGGACTG GGTTATTTTG ATGGTGGAAC TCTCTACGAA 
TCGGCCAATC ACAAGCGAGC CGATAACAGG CAGTGGGGTA CTGTAAATTT TGATTTATCT 
AAACCTGAAG TCCGAAGCTT CCTAATATCC AATGCTTTAT TTTGGTTGGA TGTGTATCAT 
ATTGATGGTC TGCGGGTGGA TGCAGTGGCC TATATGTTGT ATTTGGATTA CGGTCGGGCT 
GAAGGTGAAT GGGACCCCAA TCAGTTCGGG GGCAAGGAAA ATCTGGATGC CATTTGCTTC 
ATGAAAAAAT TAAATGAATT TGTGTTTAAG TATTACCCCA ATACCCTTAT GATTGCCGAA 
GAATCCACGG CTTGGCCCCT GGTAACCCGA CCAACTTATT TAGGTGGGTT AGGTTATAAC 
TACAAGTGGA ACATGGGCTG GATGAATGAC ATTCTCCGAT ACATGCAGAT GGATCCGATT 
CATCGAAAAT GGCACCACAA CCTGTTAACC TTTTCCTTTA TGTATACATT CTCGGAAAAT 
TATATCCTGC CATTGTCCCA TGACGAGGTG GTACATGGAA AAAAGTCTTT GCTTGATAAA 
ATGCCCGGTG ATTATTGGCA AAAATTTGCC AATCTAAGAC TATTATATGG CTATATGATG 
GCCCATCCAG GGAAGAAACT CTTGTTTATG GGTGGAGAAT TTGGTCAGTT TAGCGAATGG 
AATGAAAACC AAAGTCTGGA TTGGCAGCTT CTTGACTACG ACTTACATAA AAAAATGCAT 
GATTATGTGA AGAATCTAAA TCACTTTTAC AGGGCGGAAA AATCCCTTTG GATGTTGGAT 
CACCATGAAA GTGGATTTCA ATGGATTGAT CCCCATGATT ACACACAAAG CATTATTACT 
TTTATGAGAA AAGGTACAAA CCCAGAAGAG TTTATCATTG GTATTTTCAA TTTTACGCCG 
GTAGTTCGGG AAGGATATCG TATTGGTGTA CCCCGACTAG GAGAATATCA TGAAGTATTT 
AACAGTGATT GGATTGCTTT TGGGGGCTCC GGAGTGATAA ATCATCCATC AATGGCAGAG 
GATACCTCCT GGCATAATCA ACCTTTTTCT CTGTCAATGA GAGTACCACC CTTAGCAGTT 
GTTTTTTTAA AACTAAAATA A 

 

Protein sequence

MESFPGEIDR FLFHEGSHVR SYKIFGAHSA IQDGLAGVRF TLWAPNAADV RLVGDFNEWQ 
GHLHRMKRVK DSPIWSLFIP GLPENSLYKY EIYTHQGEVL LKADPYAFFS EMRPATASRV 
FNIEDYQWQD QAYQEQKKQQ SMYKQPVNIY EVHLGSWRRK KDVFLNYQEL ANQLIDYVID 
MGYTHIELLP VMECPLDASW GYQLTGYYAV TSRYGTPFDF MYFVDQCHQR GIGVILDWVP 
AHFCKDGHGL GYFDGGTLYE SANHKRADNR QWGTVNFDLS KPEVRSFLIS NALFWLDVYH 
IDGLRVDAVA YMLYLDYGRA EGEWDPNQFG GKENLDAICF MKKLNEFVFK YYPNTLMIAE 
ESTAWPLVTR PTYLGGLGYN YKWNMGWMND ILRYMQMDPI HRKWHHNLLT FSFMYTFSEN 
YILPLSHDEV VHGKKSLLDK MPGDYWQKFA NLRLLYGYMM AHPGKKLLFM GGEFGQFSEW 
NENQSLDWQL LDYDLHKKMH DYVKNLNHFY RAEKSLWMLD HHESGFQWID PHDYTQSIIT 
FMRKGTNPEE FIIGIFNFTP VVREGYRIGV PRLGEYHEVF NSDWIAFGGS GVINHPSMAE 
DTSWHNQPFS LSMRVPPLAV VFLKLK