Gene Dred_1440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1440 
Symbol 
ID4956899 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp1561766 
End bp1563055 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content43% 
IMG OID640180615 
Producthydrogenase large subunit 
Protein accessionYP_001112795 
Protein GI134299299 
COG category[R] General function prediction only 
COG ID[COG4624] Iron only hydrogenase large subunit, C-terminal domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACTAAAT TAACATATGA TGATATTTTT AAAGATCTTG TTAAATCTGC CTTTGACGGG 
AAACTGGAAC AAAAAATTAA AAAATTAGAA AAGCAAGGAG ACAAGCATAT TCAGGAGTAC
ATAAACTACG CCACAGGTGG AGGGGACTCT GACAAGGTTA TTTTTAAGAT AAGGGATTGT
GATCTGGATT GTGGGTGCAA TGATCCAGGA TGTCAGGTTT CCTGTTTAAT GGGTGCCATT
GAACGGGATG AAGAGGGAAA GGTGGTTATT AGAAGCGGAG ATTGCAATGA TTGTGGTGAG
TGTGTAAATG TTTGCCAGCA TGACTGTTTG ATAGATAAAA AAGAGTTTAT CCCCCTAGTG
GAGGTATTAA AGGACCGTAA AGTTCCGGTA TACGCCATCA TAGCCCCAGC CTTTATTGGT
CAGTTTGGCT CAGAAGTTAC ACCGGGGAAA ATGAGGGCGG CTCTAAAAAG GTTGGGTTTC
TACGGGATGG TAGAGGTGGC TCTGTTTGCG GATATATTAA CCTTTAGAGA AGCTTTGGAA
TTTGATGCCC ATGTGCGTAA AGAGGGAGAT TTTGTACTTA CCAGCATGTG TTGTCCCATG
TGGGTATCAA TGGTGAAAAA GGTATATAAA CAATTGGCCC CCCATATAAC CCCTTCGGTA
TCACCGATGG TAGCTTGCGG TCGAGGTGTC AAGAAGCTTC ACCCGGATGC CAAGGTGGTC
TTCATAGGTC CCTGCATCGC GAAAAAAGCA GAGGCAAAGG AGCCTGATGT AAGAGATGCT
GTTGATGTTG TCATCACATT TAAAGAACTA AGGCAGATTT TTGAAGCTGT GGGTATCAAT
CCAGCAGAGA TGGAGGAAGA TGAAAAGGAA CACTCCTCCA CTGGCGGAAG GATATATGCC
CGTACCGGCG GGGTCAGTAA GGCAGTGGCA GATACGTTAA AGAGAATAAG ACCAGATAAG
CCTATCCAGA TTAAAGCCGT TCAAGCCCAT GGTGTAAAGG AATGCCGTAA AATGTTACAG
GATGCCTTAG AGGGAAAAAT ATCTGCTAAT TTTTATGAAG GTATGGGCTG TGTGGGTGGC
TGTGTGGGAG GTCCCCATGT CTTAATAGAC CCTGCCCAGG GTACTGACCT GGTTAATGAT
TATGGAGAAG AAGCGTTAAG CCTCACACCG GCTGACAACA AATATGTTTT GACTCTGCTT
AAAAGTCTTG GTTTTGATGA TATTGAAGAT TTGTTTGATG AAGAAAAAGC TAAGATTTTT
AGTAGAAGTT TTAACCAACA ACCGGAATAG
 
Protein sequence
MTKLTYDDIF KDLVKSAFDG KLEQKIKKLE KQGDKHIQEY INYATGGGDS DKVIFKIRDC 
DLDCGCNDPG CQVSCLMGAI ERDEEGKVVI RSGDCNDCGE CVNVCQHDCL IDKKEFIPLV
EVLKDRKVPV YAIIAPAFIG QFGSEVTPGK MRAALKRLGF YGMVEVALFA DILTFREALE
FDAHVRKEGD FVLTSMCCPM WVSMVKKVYK QLAPHITPSV SPMVACGRGV KKLHPDAKVV
FIGPCIAKKA EAKEPDVRDA VDVVITFKEL RQIFEAVGIN PAEMEEDEKE HSSTGGRIYA
RTGGVSKAVA DTLKRIRPDK PIQIKAVQAH GVKECRKMLQ DALEGKISAN FYEGMGCVGG
CVGGPHVLID PAQGTDLVND YGEEALSLTP ADNKYVLTLL KSLGFDDIED LFDEEKAKIF
SRSFNQQPE