Gene Dred_1434 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1434 
Symbol 
ID4956758 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp1555521 
End bp1556351 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content42% 
IMG OID640180609 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_001112789 
Protein GI134299293 
COG category[R] General function prediction only 
COG ID[COG1237] Metal-dependent hydrolases of the beta-lactamase superfamily II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACTGA AAATTACTGT AATTGCAGAG AATGATGTAA AAAAAAGATA CCTGTTGGCA 
GAACATGGTT TGTCGCTGTT GGTGAAAATC GGCAACTATC AGTTACTCTT TGATACAGGG
CAAGGTCTGG CCATTGAATC CAATGTCCGG GCCATGCAAT TGGATTTGAC CAAAATCAAT
GCCATGGCAC TAAGTCATGG ACATTATGAC CATACCGGGG GACTCAAAAG GGCCCTCGCC
CTAAGTGGTC CAAAACCAAT CTATGCACAC CCTGGGGTTT TTGATGATAA ATACTCCACC
AACCGAGAGG GAGAACACAA ATCGGTTGGA ATACCCTTTA GCAAAAAGGA ATTGGAAATG
CTAGGGGCTG AATTTCATCT GCAGTCAACT CCAATTCATT TGGGCAGTGA TATTATACTA
TCCGGTCAGA TTCCAAGGAC AACTGATTTT GAAGAAATAA ATGATCGTTT TGTTATAAAA
AAGGACGGGA AATACGAGGT AGACCCACTA TTGGACGATC AGGCATTGTT TATAAAAACT
GCTAAAGGGG TAGTTGTAAT TGTTGGCTGC AGTCACTCGG GAATTATTAA TATTTTAAAA
TATGCCAGGC AACTAACAGG GGAAGAGGAT ATTTATGCTG TGGTGGGCGG TACGCATCTG
GTGGAAGCCA ATGAGGAAAG GCTGCACCGG ACCATTGAAG AGTTAAGGGC AATGAAGGTG
GAAAAACTGG CGGTTTCCCA TTGTACTGGT TTTCAGGCCC AGGTAAAACT GAAAGAAACC
TTTGGACATG GGTTTGTCTT AAACAATGTG GGGAATAGCA TTTGTATTTA G
 
Protein sequence
MQLKITVIAE NDVKKRYLLA EHGLSLLVKI GNYQLLFDTG QGLAIESNVR AMQLDLTKIN 
AMALSHGHYD HTGGLKRALA LSGPKPIYAH PGVFDDKYST NREGEHKSVG IPFSKKELEM
LGAEFHLQST PIHLGSDIIL SGQIPRTTDF EEINDRFVIK KDGKYEVDPL LDDQALFIKT
AKGVVVIVGC SHSGIINILK YARQLTGEED IYAVVGGTHL VEANEERLHR TIEELRAMKV
EKLAVSHCTG FQAQVKLKET FGHGFVLNNV GNSICI