Gene Dred_1427 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1427 
Symbol 
ID4956610 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp1547723 
End bp1549009 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content47% 
IMG OID640180602 
Producthypothetical protein 
Protein accessionYP_001112782 
Protein GI134299286 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000425148 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGGGAT TATATGAGGT TCTAATGAGT GCCTCCAGAG CCCATGCGAA ATGGGAACTG 
GAGATGTCCA ATAATATCAT AAGAAGCCGG AAACACCTAT TAGTTTTACT CGTTATGTGT
TTACCATTAA TTATACCGGC CATTGGTTAT GCCGCTGAAT TACCATCCTT CCTGGGAGGT
AAAAGTGCCT TTGGACCGTC CCATTTTACT CCACTGATGT TTTATGGATC TATGGCGGTG
GGTGTCTGTG CTGGTCTCAT TACAGGTTGT ATCGGTGCTG GAGGTGGCTT TGTTATAACG
CCAGCCCTGA TGAGCCTAGG TGTAAAAGGA ATTCTGGCGG TAGGTACCGA CCAGTTTCAC
ATCTTTGCGA AGGCTATCAT GGGCACTGTT ATTCACAAAA AGCTAGGAAA CGTCAATGTA
TCCCTGGCTA TCGCTTTCCT GGTAGGTTCT GGAATTGGTG TTACTGGTGG CGGCACCTTG
AACCGTGCCC TGTTTAATGC GAACCCTGTT ATGAGCGACT TTGTCATTAG TACGATTTAT
GTGGTTATCT TAGGATTTCT TGGTTTCTAT TCCATGTATG ACTTTCTTAA AACCAGAGGG
CAAATTGATA AGGGGGATGC CCATGGTGGT CCTGTCGGTA TGACTGGACT TGCACGGAAG
TTGCAGAGTA TTAACTTGGC TCCCATGATT AAGTTTGATG AAGAAATTAC CCCTGGCGGT
CGTAAAATCT CCGGTTGGTT TGTGACCCTA TGCGGCTGCG TTACTGGCTT TCTGGCAGCC
ATCATGGGCG TAGGCGGTGG ATTTGTTACC TTCCCAATGT TTGTTTACGG CTTGGGGGTT
TCTTCCTTCA CTACAGTGGG AACAGATATC CTGCAGATCA TCTTCACCGC CGGCTACAGC
TCCATCACTC AATATGCTAT CTACGGCTAT ATCTTCTACA CCCTGGCCAT GGGGATGCTG
GTTGGTTCCC TGCTGGGTAT CCAAATTGGG GCAGCCACCA CCAAGGTCGT TCCAGGTATC
TACATCAGAG CTTTCTACGC AATTGCCATC ATGGCTGGTT TTGTCAACAG AGCCTTTGCT
CTGCCGGAGA AAATGGGACA AATGGGATAT ATTTCTATCA CCAAAGAAAC TGGGGTGCTG
CTTAACAGCA TAGGAACTTG GATCTTCTTT GGATTAATAT TACTTTTTGC TGGCTGGATA
GTTATCAGTT TTGTCAAGGG GCTACCCACC TTACGGGCTG AAACTGCCAA AACTTCTGTA
TCCGATGGAA AAGGAGTGAG CCACTAA
 
Protein sequence
MRGLYEVLMS ASRAHAKWEL EMSNNIIRSR KHLLVLLVMC LPLIIPAIGY AAELPSFLGG 
KSAFGPSHFT PLMFYGSMAV GVCAGLITGC IGAGGGFVIT PALMSLGVKG ILAVGTDQFH
IFAKAIMGTV IHKKLGNVNV SLAIAFLVGS GIGVTGGGTL NRALFNANPV MSDFVISTIY
VVILGFLGFY SMYDFLKTRG QIDKGDAHGG PVGMTGLARK LQSINLAPMI KFDEEITPGG
RKISGWFVTL CGCVTGFLAA IMGVGGGFVT FPMFVYGLGV SSFTTVGTDI LQIIFTAGYS
SITQYAIYGY IFYTLAMGML VGSLLGIQIG AATTKVVPGI YIRAFYAIAI MAGFVNRAFA
LPEKMGQMGY ISITKETGVL LNSIGTWIFF GLILLFAGWI VISFVKGLPT LRAETAKTSV
SDGKGVSH