Gene Dred_1422 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1422 
Symbol 
ID4956589 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp1540361 
End bp1541197 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content43% 
IMG OID640180597 
ProductATPase 
Protein accessionYP_001112777 
Protein GI134299281 
COG category[R] General function prediction only 
COG ID[COG5271] AAA ATPase containing von Willebrand factor type A (vWA) domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGCAG AACAGGCTCT TAAAGAACAA TGGGGAATTA ATATAAATAC CATATCGGAC 
TTTTGGGTTG ACCCCGAGAA ATTATCAGTT ATACAGGATT TGATGTTTTC TGGAATTAAC
GTTATGCTTA CCGGAGATCC CGGTACCGGT AAAACAGAAC TTACAAAACG ATTGGCCCAG
GCCCATAAGC TACCCTTCCA CCGGGTTAAT GTTGGTGCCA TTCGGACTCC CAGGGATTGG
TTCGGCCACT GGGAATTCAT TGGCGGACAA ACTGTTTTTG TTCAGTCGGA GTTTGTTAAT
GCTATTCAGC GTCCGGGTAT GATAGCCCTG GACGAGTTTA ACCGGGTTAC ACCGGATATT
CATAACTCCA TTTATACCAT TCTTGATCAC AACAGGGAAG TTTATATTGA AGAAACCAAG
CAGTTTATTA CAGTACATCC ACAATGTATT TTTGTAGCCA CAGAAAACCG TGGACGAAGC
CATACAGGCA CCTTTATGGA AGATACAGCA GTGGAAGACC GCTTTGAAAC AATTAAACTG
GAGTTACCAC CGGTGGAAAT AATGGCACAA CTGTTAGAAA GGGTTTACAG GGCCAGTGAG
GAACAAGCAT TACTTTTAGC TAGAATAACC CATAAATTAA ACAGCCTTTA TCATGAAGAA
AGCTTAAGCC GTCCCACTGG ATTCCGTCCT GCCATAGCGG CTACGGCGTT AATTAAAAGG
GGACAACCCC TTAATACGGC TCTAAAATAC ACTTTTGTCA ACCGTTTTTC CCCAGAGGGA
GGCGTGGACA GCGAGCAAAC CACAGTTTTA CAAGTTATAC AAGCTTATTT GAAGTAA
 
Protein sequence
MTAEQALKEQ WGININTISD FWVDPEKLSV IQDLMFSGIN VMLTGDPGTG KTELTKRLAQ 
AHKLPFHRVN VGAIRTPRDW FGHWEFIGGQ TVFVQSEFVN AIQRPGMIAL DEFNRVTPDI
HNSIYTILDH NREVYIEETK QFITVHPQCI FVATENRGRS HTGTFMEDTA VEDRFETIKL
ELPPVEIMAQ LLERVYRASE EQALLLARIT HKLNSLYHEE SLSRPTGFRP AIAATALIKR
GQPLNTALKY TFVNRFSPEG GVDSEQTTVL QVIQAYLK