Gene Dred_1398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1398 
Symbol 
ID4955636 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp1507259 
End bp1508635 
Gene Length1377 bp 
Protein Length458 aa 
Translation table11 
GC content44% 
IMG OID640180573 
Productphosphomannomutase 
Protein accessionYP_001112753 
Protein GI134299257 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1109] Phosphomannomutase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGCGGTT TGGATGGTAT AAACTTTCAT ATCTTTCGTG AGTATGATAT CAGGGGGAAG 
GAACAAACGG ATTTTACCGA TGAGGCGGTG GAATTGCTGG GCCTTGGCCT AGGTACCTAT
TTTCTTCAAA AAGGGGAAAG GGATGTGGTG GTCTGTCAAG ACAACCGGGC CAGTTCCCCC
AGGCTAAAAA CAGCCTTAAA CAAAGGTCTG TTACAGACTG GCTGTAACGT CATAGACATC
GGCGAAAACC CGACACCGGT ATGCTACTTT GGATTACAGC ACCTGTCATT AACAGCAGGG
GTTATGATTA CCGGCAGTCA CAATCCGCCA GAGGATAACG GTTTTAAAAT TTCTTCCGCA
GGTAGCACCA TCTTCGGAAA AGAGATACAA AGGATTAAGG AAATTGTTGT AGATGGCCAT
TTTTTATCTG GTTTAGGTCA ACTAACTAAA TATGATATTA AAGAAGATTA TCTAAAGTAT
TTAATTTCCA GAATACACTT ATACCGTCCC CTGAAAGTAG TAATAGACGC GGGTAACGGC
ACTGCCGGTC CGCTGGCAGT GGAATTGTTT AATAGGCTGG GCTGTGAGGT AATTGAGTTA
TATTGTGAGT CTGATTCATG TTTTCCCAAC CATCATCCTG ATCCTACCGT TCCCGATAAT
TTAAGAGATC TGCAGCAAAG GGTTTTACAG GAGAAGGCCG ATGTGGGCCT GGCCTTTGAT
GGGGATGGTG ACCGGTTGGG GGTGGTGGAT AACCTGGGGA AAATAATTTG GGGAGACATC
TTGCAGATTT TATTCTGGCG GGAGATATTG CCCCAAAACC CCGGTACCCC CGTAATAGTG
GAAGTAAAAT GCAGCCAGGC CCTGGTGGAG GAGGCCAAAA GCTTAGGCGG CAACCCCTTC
TTTTATAAAA CCGGCCACTC GTTGGTTAAG GCCAAAATGA AAGAAGTAGG TGCTTTATTT
ACTGGTGAAA TGAGCGGTCA CTTCTTTTTT GCGGACGAAT ATTTTGGCTA TGACGATGCC
CTTTATGCCG GGGCTAGGTT GTTAAGACTG CTAAGCCAAT CCAAGAAATC TTTAAGCCAG
CTGTTGAACA ATATACCTTC CTATGTTTCA ACGCCTGAGA TTCGATTGCC TTTTTCGGAT
AATTATAAGA AGGAATTAAT CCAAAGGATT AAAGAAAAAT TTGTTGGTGA AGGTTACGAG
GTCATTGATG TAGATGGAGC CAGAGTTATC TTTCCCAATG GCTGGGGGGT ACTTCGATAT
TCAAATACCC AGCCAGTGGT GGTAATGAGG GCAGAGGCTA AAGATCAAGC CTCTTTAGGA
GATATTGTTA ACATATTAAA GACAACTTTT GTTGATACAT TGGAGAGAAT GAAATGA
 
Protein sequence
MSGLDGINFH IFREYDIRGK EQTDFTDEAV ELLGLGLGTY FLQKGERDVV VCQDNRASSP 
RLKTALNKGL LQTGCNVIDI GENPTPVCYF GLQHLSLTAG VMITGSHNPP EDNGFKISSA
GSTIFGKEIQ RIKEIVVDGH FLSGLGQLTK YDIKEDYLKY LISRIHLYRP LKVVIDAGNG
TAGPLAVELF NRLGCEVIEL YCESDSCFPN HHPDPTVPDN LRDLQQRVLQ EKADVGLAFD
GDGDRLGVVD NLGKIIWGDI LQILFWREIL PQNPGTPVIV EVKCSQALVE EAKSLGGNPF
FYKTGHSLVK AKMKEVGALF TGEMSGHFFF ADEYFGYDDA LYAGARLLRL LSQSKKSLSQ
LLNNIPSYVS TPEIRLPFSD NYKKELIQRI KEKFVGEGYE VIDVDGARVI FPNGWGVLRY
SNTQPVVVMR AEAKDQASLG DIVNILKTTF VDTLERMK