Gene Dred_1393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1393 
Symbol 
ID4956148 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp1501267 
End bp1502388 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content36% 
IMG OID640180568 
Productglycosyl transferase family protein 
Protein accessionYP_001112748 
Protein GI134299252 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATCAGTG TTATTATGCC TGTCTATAAC GGGGCAGAAT TTTTAAAAGA AACCATTGAA 
AGTGTATTAA ACCAAACAGA AAAAAACTTT GAGTTGATTA TCATTAACGA CGGATCTACC
GATCAGAGTG AGGATGTTAT ATTATCCTTC TCTGACCCAC GCATTCTATA CTTTAAACAG
GAAAATAGTG GAGCAGCAGC GGCAAGGAAC AGGGGATTAG AAAAAGCTTG TGGTGATTTT
GTGGTTATTC AAGATGCAGA TGACATATCT TTACCAAACC GTTTTGAAGT TCTAAAAAGT
CAATTCACCT CTCCAACTGT TGGAATTGTC CATTCAGATG TTTTACTAAT AAACGAAGAA
AATCACCCAA TGGGCTACTG GGCAGCCAGT AACATTGAAA AGAGTAGTAT GTTAAGGTTT
TTTCTTAAAA TAGGAACGCC CTTTAATAAT AATAGTTTAA TGTTACGACG GAAAGCATTA
GAAAATTTAC GCTATGATCC ATCCCTGCGA ATTGGGGAAG ATACTGAAAT GATCTCTCAT
GTGGCCAAAA GCTGGGATGC AGTTCATGTT CCGAAGCCGT TACTTCTATA CCGCCGACAT
ACTAATAATT TAACTAATGA AAAAGACTAT CATGTTTTAT TTGCCCATAT GCAAAAATTC
TTAGACAGTC ATACCCTTGA AGAATTGGTT CCGGAACTTG ATTGGCACAA TGCCGAATTA
AAAGAGAACC AGGCCAGAGC ATGTGCCATT ATTTCCTTAT TCTTATTAAG ACGTAGGATG
GTTCATGATT GTCAAGCATG GTATAACAGA TCACTTGAAA CACTAAATGG TTCCAACGAT
TCTATTGTAA ATGCCATCGG TCATATAATA TTAGGTAACT ATAAAAATGC TTTGAATTTC
CTTCATTCCT ACCCTGAACA AAACCCTGTG GTTGAAAATT ATGTTGGAGA AACCTATGCC
TTATTAGGAC AGATGGAGAA AGCCTTTGCT CACTTTTTAA AAGCACTACA GTTAAATCCC
CTTTATCTAG AACCTCTTGA TAACTTAAAA GCAATCGGTG GCCTAAAAGG GTTGAATTTG
CTGGATCGGT CTTGGAATAA TTTTTTATTT GCAAATAATT AA
 
Protein sequence
MISVIMPVYN GAEFLKETIE SVLNQTEKNF ELIIINDGST DQSEDVILSF SDPRILYFKQ 
ENSGAAAARN RGLEKACGDF VVIQDADDIS LPNRFEVLKS QFTSPTVGIV HSDVLLINEE
NHPMGYWAAS NIEKSSMLRF FLKIGTPFNN NSLMLRRKAL ENLRYDPSLR IGEDTEMISH
VAKSWDAVHV PKPLLLYRRH TNNLTNEKDY HVLFAHMQKF LDSHTLEELV PELDWHNAEL
KENQARACAI ISLFLLRRRM VHDCQAWYNR SLETLNGSND SIVNAIGHII LGNYKNALNF
LHSYPEQNPV VENYVGETYA LLGQMEKAFA HFLKALQLNP LYLEPLDNLK AIGGLKGLNL
LDRSWNNFLF ANN