| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_1362 |
|---|
| Symbol | |
|---|
| ID | 4955613 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum reducens MI-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009253 |
|---|
| Strand | + |
|---|
| Start bp | 1462775 |
|---|
| End bp | 1463734 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640180540 |
|---|
| Product | pyridoxal-5'-phosphate-dependent enzyme, beta subunit |
|---|
| Protein accession | YP_001112720 |
|---|
| Protein GI | 134299224 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0031] Cysteine synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.314138 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTTCAA AAATTTCTTC ATCTGTGTTA GAGGCCATCG GCCATACACC ATTAATTGAA
TTATCACGCA TCGCCGGAGA AGTACCAGGA AAACTATATG CTAAGGCAGA GTTTATGAAC
CCCACCGGTA GTATGAAGGA CCGAATTGCC CTGAAGATGA TCGAAGATGC TGAAAAAGAG
GGGAAACTTC GGCCAGGTAG CGTTGTCATA GAAGAAACCA GTGGTAATAC CGGGATTGGT
CTAGCTATGG TCTGTGCTAT AAAGGGATAT AAGTTTATTG CCGTTATGTC GGAGGGAAAT
AGCCCTGAAC GACGGCAGAT CTTGCAAGCG ATGGGAGCAA GGGTTGAATT AGTTCCTCAG
GTTGAGGGAG GTAAACCCGG TAGGGTAACC GGAGAGGATT TGGCTTTGGT AGAAAAAAGA
GCAGAGGCAT TAACGGAAGA AATGGGAGCA CTATGGGTCA ATCAATTTCA CAATCCTAGC
AACTGTGTGG CCCATTATGA AACCACAGCC CAGGAAATAT GGCAACAAAT GGATGGTAAA
ATTGATTATT TTTTAGATGT TGTTGGAACT TCCGGTACAT TTACCGGCAT TGCCAGCGCC
CTAAAGGATA AGGACTCCAA AATTCAATGT TGGGCTGTGG AACCAGCCAC AGCACCGGTG
CTGGCAGGCA AACCGGTAAC GAATCCACAG CATGTCTTGC AGGGTTCCAG TTATGCTAAA
GTACCAGATC TTTGGAATTC CCAGGTCTGT GATGGCTATC TTTCGGTAAC CGATGGGGAG
GCAGTTCGGG CTGCCCGACG ATTGGCCACC GAAGAAGGAC TCTTTTGTGG TTATACTGCT
GGGGGTAATG TTGCTGCTGC CCTGCGACTG GCGGGTTGGT GCGACCCAGG GGCAAGAATT
GTTACGATTC TTTGTGATAG TGGAATGAAA TACCTCTCTA CGGATCTGTT CAAAGTTTAG
|
|---|
| Protein sequence | MFSKISSSVL EAIGHTPLIE LSRIAGEVPG KLYAKAEFMN PTGSMKDRIA LKMIEDAEKE
GKLRPGSVVI EETSGNTGIG LAMVCAIKGY KFIAVMSEGN SPERRQILQA MGARVELVPQ
VEGGKPGRVT GEDLALVEKR AEALTEEMGA LWVNQFHNPS NCVAHYETTA QEIWQQMDGK
IDYFLDVVGT SGTFTGIASA LKDKDSKIQC WAVEPATAPV LAGKPVTNPQ HVLQGSSYAK
VPDLWNSQVC DGYLSVTDGE AVRAARRLAT EEGLFCGYTA GGNVAAALRL AGWCDPGARI
VTILCDSGMK YLSTDLFKV
|
|---|
| |