| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_1348 |
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| Symbol | |
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| ID | 4958009 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | + |
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| Start bp | 1444338 |
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| End bp | 1445249 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640180527 |
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| Product | RluA family pseudouridine synthase |
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| Protein accession | YP_001112707 |
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| Protein GI | 134299211 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.628416 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAAAATA AATGCATTAT AGAAAAGTTG CAGTTGATTA TCCCCCAGAC AATGGATGGG
TGGACGGTAG AAAGGGTATT AAGACGGGAA GTTGGGGTTT CCCGTACTTT ATTGCGCAGG
GCTAAAAGAA ATAGAGTTAT TTTATTAAAT CAGCTACCCG TTAAAACCAA TGTGACAGTG
AAAACTGGAG AGGTTTTGGA ACTATGGATG GGAAGTCAGG AGACCCAGGT GGTACCAGAA
AGAATGGAAT TAAATATTCT CTATGAAGAT GCTCATCTAC TGGCAGTTAA TAAGCCACCC
GGTATGCTGG TACATCCTTT AACCAATGAA ACTTCGGGCA CATTGGCTAA CGGTGTGCTT
TATCACTGGC TGCAGCAGGG AACCATTGAC CGATTCAGAC CTGTACATCG CCTGGATAGA
AATACCTCTG GAATTGTTTT AATCGCAAGG AATCCCTATG TCCAACAACA ATTACAAATC
CAGATGAAGC AAGGACAGTT TGTTCGTCGT TACTTAGCCC TAGTAAAAGG GAAAGTACAA
CCCGAGCAAG GAGTTATTCA AGCACCCATT GCTTTAGAGG AAGGCAGTTT TATAAAAAGA
ATGATCTCTC CGGCAGGAAA AGAGGCCATC AGTCATTATC AAGTTCTTCG AACTTTTAAC
CAAGCCAGTC TTGTTAGGGT AGAACTGGAG ACGGGCAGAA CCCATCAGGT TAGGGTCCAT
ATGGCCCATA TGGGACATCC TTTGCTGGGG GATTCTTTGT ACGGAGGAGA TACTTCAAAT
ATTAAACGCC AGGCATTGCA TTGTGCGTAC CTAGCATTTA ATCACCCTGT GCAGGGAAGC
CGTATTAAAA TTTCCTGTTC AGTTGCCGGA GATATTAGGC AATTGATGGA AGAACACAGT
AAAAAAGCTT AA
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| Protein sequence | MENKCIIEKL QLIIPQTMDG WTVERVLRRE VGVSRTLLRR AKRNRVILLN QLPVKTNVTV
KTGEVLELWM GSQETQVVPE RMELNILYED AHLLAVNKPP GMLVHPLTNE TSGTLANGVL
YHWLQQGTID RFRPVHRLDR NTSGIVLIAR NPYVQQQLQI QMKQGQFVRR YLALVKGKVQ
PEQGVIQAPI ALEEGSFIKR MISPAGKEAI SHYQVLRTFN QASLVRVELE TGRTHQVRVH
MAHMGHPLLG DSLYGGDTSN IKRQALHCAY LAFNHPVQGS RIKISCSVAG DIRQLMEEHS
KKA
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