Gene Dred_1340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1340 
Symbol 
ID4957530 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp1435244 
End bp1435642 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content47% 
IMG OID640180519 
Producthypothetical protein 
Protein accessionYP_001112699 
Protein GI134299203 
COG category[R] General function prediction only 
COG ID[COG1342] Predicted DNA-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000222625 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGAGAC CTCCAAAATG TCGGCAGGTG GCAAGGTTGC CAGTGGTAAC ATATTTTAAA 
CCCCAGGGGA TTCCCATGAG CCAGCTTTCC GAAGTCATAA TACCCGTTGA GGAACTGGAA
GCAGTTCGTC TCTGTGATCT TGAAGGTTTG GAGCAAGAGG ACTGTGCCGA GAAAATGGCA
GTATCAAGGC CTACCTTTCA TAGGATCATC ACCGCAGCCA GAAAAAAAAT TGCAGAGGGG
CTTATAAATG GCCTGGCAAT TCGAGTTGAG GGGGGGAACT ATCAGGTTTC TTTATCCAAG
CTGAAGTGTA AGGCATGTGG TTTTAAGTGG GAGGGGACCT TTTGTAAACG TCATACCAAA
TGCCCAAAAT GTAATTCAAG GGATTGGGAT GGATCATAG
 
Protein sequence
MARPPKCRQV ARLPVVTYFK PQGIPMSQLS EVIIPVEELE AVRLCDLEGL EQEDCAEKMA 
VSRPTFHRII TAARKKIAEG LINGLAIRVE GGNYQVSLSK LKCKACGFKW EGTFCKRHTK
CPKCNSRDWD GS