Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_1335 |
Symbol | |
ID | 4957068 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | + |
Start bp | 1431919 |
End bp | 1432524 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640180514 |
Product | cell wall hydrolase, SleB |
Protein accession | YP_001112694 |
Protein GI | 134299198 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3773] Cell wall hydrolyses involved in spore germination |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0172896 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGCAGCTAA AAAGAAGTGA TTTATTATGG ATGACCTTTG TGATGGCAGC TTTCCTTATG TTAATGGCAC AATTCAGTGT TATTAATGCT AAAAAAAATG AAATTGAGAA TAAGCAAATA GCGAAGACCC TTTATGAAAC AAACAAGTCA ATGCAGCGGG CTGAAACCGT TGTAGAAAAT TCTGGAGTTT ACAAAGTAAA ACCTCAAAAA AAACGACCTG AGAACAATAT AACGGTATCC CGTGGTAACT TAAAACGTGA CGAAATAACT TTGATGGCAA GAATTATCGA AGCTGAGGCT GCCAATGAGC CCTATGAAGG AAAGATTGCA GTTGGAGCGG TTATTTTAAA CCGAATCGAA GACGATAAGT TTCCAGATAA TCTGCATGAA GTGATTTACC AGAAGAGGGC CTTTGAGTCG GTGGCAAACA ATCACTATAA AAGAGATTAT AGTACCGAGT CCATTCAGGC GGCCCAGGCA GCCATTGCAG GACAGGACCC TACCAATGGG GCATTGTTTT TCTGGAACCC ATCTGTAGCG AAAAGTGGCT GGATTTGGTC CAGGCCTGTG ACAGGTAAAA TTGGTAACCA TGTATTTGCA AAATAA
|
Protein sequence | MQLKRSDLLW MTFVMAAFLM LMAQFSVINA KKNEIENKQI AKTLYETNKS MQRAETVVEN SGVYKVKPQK KRPENNITVS RGNLKRDEIT LMARIIEAEA ANEPYEGKIA VGAVILNRIE DDKFPDNLHE VIYQKRAFES VANNHYKRDY STESIQAAQA AIAGQDPTNG ALFFWNPSVA KSGWIWSRPV TGKIGNHVFA K
|
| |