| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_1330 |
|---|
| Symbol | |
|---|
| ID | 4956356 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum reducens MI-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009253 |
|---|
| Strand | + |
|---|
| Start bp | 1426530 |
|---|
| End bp | 1427642 |
|---|
| Gene Length | 1113 bp |
|---|
| Protein Length | 370 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640180509 |
|---|
| Product | formate dehydrogenase |
|---|
| Protein accession | YP_001112689 |
|---|
| Protein GI | 134299193 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.342648 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACAT ATACGATAAA ATCAGGGGAC ACCCTGAGTG CAGCCCGGGG TTTTTTAAAA
GCGTTAATTA CATCGGGAAA AGTAAGCTCC ATTTTGGTGC CGCAGGAAGT TTTGTCGAAA
ACCAATGTGG TTCCTACATT AATAAAGGAT CCTGCAATGT TCGATGCGGC AAATCCCTTT
GCCCCTGTAA ACGGCCTTAA TGCCGCCAGG CTGGTGGCAA ATCTTTCCCG CAATCTGCCG
GAGAAGATTG CCGTGGTGCT TCGTTCCTGT GAAGTGCGTG CTTTGATTGA GTTGGTTAAG
CTTCAGCAGG CTAAATTAGA CAACTTAGTT ATCATTGGTG TGGATTGTGT GGGAACATTT
CCTGCCAGTG ACTATGCAAA TATGGTTAAA GAAAACAAAA TTGATGCAAG TAAATGGGTA
ACCCAGGCCG CCGACGGTAA TAACCCCATT GGCGTGCCAT TGCGCCGGGC CTGCACCGTG
TGTGCGTATC CCGAGGTTGG TAATGCAGAC ATTGTCTTGG GCTGGTTGGG GATGGGCGGT
AATTTGCTTA TCTCTGCCAA AGATGACGTG GATCTAGCTG ATATAGCTGG TTTAGATAGT
ATATCCGTAC CGGATACTCG GATAAAATTA TTAGAAAAAA TTATCACAGA AAAGGCACAA
GCCAAGACCA AGGCCATAGA TGAGTTCAAG AGTTCTGTTA GCAGCATGGA AAAGCTGGCA
GAAGTATTGG CAACCTGTAT AAAATGCCAG AATTGTCGCC AGGCCTGCCC CATTTGCTTC
TGTCGAGAGT GTGTATCAGC GGGTCCCATT TTTGATCACA ATGGGGATAA ATATCTGGAA
TATGCCAAGA GAAAGGGAGC CATAGAGTTA CCCACCGATA CCACACTATT CCATCTAACC
AGAGTGAATC ATATGGGGCT GTCCTGCGTG GGCTGTGGTC AATGTGAAAA TGCCTGCCCC
ATGAATATTC CCGTGGGATT AATGTTCCAA GCGTTGTCTC AACCCAATCA GGATCGTTTT
GAGTATGAGC CAGGACGTTC ATTGGAGGAG CCCATTCCTT TAACCGTTTA TAAAGAACAT
GAACTTGAAG AATTAAATAC CGGTAAACAC TGA
|
|---|
| Protein sequence | MKTYTIKSGD TLSAARGFLK ALITSGKVSS ILVPQEVLSK TNVVPTLIKD PAMFDAANPF
APVNGLNAAR LVANLSRNLP EKIAVVLRSC EVRALIELVK LQQAKLDNLV IIGVDCVGTF
PASDYANMVK ENKIDASKWV TQAADGNNPI GVPLRRACTV CAYPEVGNAD IVLGWLGMGG
NLLISAKDDV DLADIAGLDS ISVPDTRIKL LEKIITEKAQ AKTKAIDEFK SSVSSMEKLA
EVLATCIKCQ NCRQACPICF CRECVSAGPI FDHNGDKYLE YAKRKGAIEL PTDTTLFHLT
RVNHMGLSCV GCGQCENACP MNIPVGLMFQ ALSQPNQDRF EYEPGRSLEE PIPLTVYKEH
ELEELNTGKH
|
|---|
| |