Gene Dred_1296 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1296 
Symbol 
ID4956711 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp1388018 
End bp1388956 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content49% 
IMG OID640180475 
Productethanolamine ammonia-lyase small subunit 
Protein accessionYP_001112655 
Protein GI134299159 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4302] Ethanolamine ammonia-lyase, small subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATTGAGG AACAAATTCG GCAGATTGTA CAGGCGGTTA TCAGCCAAAT GACGGGCGAC 
GAAGCTGATA AACCACAAAG AGGGGATGCC AAGACAGAGC CTAAGGCACC GGATATTTCA
GTAGAGAAAA GTACACCGCC CTGTTGCGGG TCAATCTTAG AGGATGTAGC AGATGAAGAT
TTAGAAGATC TATCTGCGAT TGATTTGCAG AAAGAAATCT TAATACCTAA TCCCGCTGAC
CCGGCTGCCC TGGCATATTT TAAACAAAGT ACTCCTGCCA GAATCGGGGT GTGGCGTTGT
GGTGCCCGTC CCCTAACAAG GACTCTGCTC CGTTTTCGGG CAGACCACGC TACCGCCCAG
GATGCAGTTT TTAAGGAAGT TGATGAGGAA GTTTTAAATA AGTTTGACTT AGTTCGGGTA
CAAACCAAGA TTACGGACAA GGATCAATAT TTGACACGGC CAGATTTAGG CAGACAATTG
TTGGATGAAG ATCTACAAAA GATTTTGCAA AACTGTCCCA AGAATCCCCA AGTACAGATT
GTAATAGCCG ATGGTTTAAG TTCCAGGGCT GTGGAAGCCA ACCTGGAGGA TATTTTGCCC
TCCCTGAAGC AAGGGTTGGC AGCCCAAAAT CTAAAGACTG GCAAGGATAT CTTTGTCAAG
TTTGGCCGGG TAGATGTAAT GGACCAAATC GGGAAGGCTT TAGATGCTGA AGTGGTGGTG
CTGCTAGTGG GCGAACGCCC GGGTTTGGGT ACCTCTGAGA GCATGAGTGC CTATATGGTC
TACAAACCTG GCCCCCAAAC TGTGGTGGCC GACCACACGG TGGTATCCAA TATTCATAAG
GGTGGTACAC CGCCGGCCGA GGCGGGAGCC CATTTGGCCA CCGTGGTAAG GAAAATATAC
GATGCTAAGC TCAGTGGAGT GAAGCTCACC CTGCAATAG
 
Protein sequence
MIEEQIRQIV QAVISQMTGD EADKPQRGDA KTEPKAPDIS VEKSTPPCCG SILEDVADED 
LEDLSAIDLQ KEILIPNPAD PAALAYFKQS TPARIGVWRC GARPLTRTLL RFRADHATAQ
DAVFKEVDEE VLNKFDLVRV QTKITDKDQY LTRPDLGRQL LDEDLQKILQ NCPKNPQVQI
VIADGLSSRA VEANLEDILP SLKQGLAAQN LKTGKDIFVK FGRVDVMDQI GKALDAEVVV
LLVGERPGLG TSESMSAYMV YKPGPQTVVA DHTVVSNIHK GGTPPAEAGA HLATVVRKIY
DAKLSGVKLT LQ