Gene Dred_1295 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1295 
Symbol 
ID4956718 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp1386640 
End bp1388025 
Gene Length1386 bp 
Protein Length461 aa 
Translation table11 
GC content49% 
IMG OID640180474 
Productethanolamine ammonia lyase large subunit 
Protein accessionYP_001112654 
Protein GI134299158 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4303] Ethanolamine ammonia-lyase, large subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCTTA AAACCAAGTT ATTTGGCCAG GTCTTTTCCT TCCGAGATGT TCGTGAGGTA 
ATGGCCAAAG CAAATGAAGA AAAATCTGGA GATATTTTGG CCGGCATAGC CGCTAGCTCA
GCGGCTGAAC GGGTGGCTGC TAAGATTGTT TTAAGTGAGC TTACCTTGGA AGATATCTTC
AACAATCCGG CAGTTCCCTA TGAAGAAGAC GAAGTAACCC GAATTATTTA TGATAACCTG
AATCGATCCA TTTATAGTGA GATTAAGGGC TGGACCGTGG CCCAATTAAG GGAATTTATT
TTAAAAAATG AGACTGGGCC CAGTTGTATC CGTCGTGTTA GCCGGGGCCT CACCAGTGAG
ATGGTGGCGG CGGTGGCTAA GTTAATGAGC AATTTAGATT TAATTTACGG GGCCAAAAAG
ATCCAGGTTA CAGCCCATTG TAATACCACC ATCGGGGAGA AAGGTTGTTT AGCGGTGCGC
CTGCAGCCTA ATCACCCTAC CGACAGCCCC GAAGGAATTT TAAGCTCCCT GCGGGAGGGT
CTGTCCTACG GCATCGGGGA TGCCTTAATA GGTCTTAACC CGGTGGAAGA TACGGTGCCC
ATTACCACTC GTTCCCTGGA AACGATGTAT AACTTTGCCC AGGAATGGGA GATTCCTACC
CAGGTGTGTG TACTGGCTCA CGTAACGACG CAAATGAAGG CCATCGAGAA GGGAGCTCCG
GGGGATCTGA TCTTCCAGAG TTTGGCTGGC ACCCAGGCTG GTAATGAGGC CTTCGGAATT
AGTAATGACA TCTTAAAAGA AGCCCAGGAA GTGGCCCTTA AATATGGGAG ATCCACAGGA
CCCAATGTAA TGTATTTTGA AACTGGTCAG GGTTCGGAAC TGTCCTCAGA CGCACACCAT
GGCGTAGACC AAGTAACCCT GGAGGCCCGC TGCTACGGTC TGGCCAAGCA GTTCAACCCT
TTCCTGGTTA ACACAGTTGT TGGCTTTATT GGGCCGGAAT ACCTGTATGA CGCCAAACAG
GTTACCCGGG CCGGTCTGGA AGATCACTTT ATGGGCAAAC TAACCGGGAT TCCCATGGGG
GTGGATGCCT GCTACACCAA CCACATGAAG GCGGACCAGA ACGACATTGA AAACCTGGCT
GTACTGCTCA CCTCAGCAGG AATCAACTAC TTCATGGGGA TTCCCATGGG GGATGATGTA
ATGTTGAATT ACCAATGCAC CAGTTTCCAT GATATTGCTG CCCTAAGACA AACTGTAAAT
CTAAGGCCCT TACCCGCCTT TGAAAAATGG ATGGAGAAAA TGGGTCTGTT GAAAAATGGT
TACCTTACGA GCAAGGCCGG GGATCCTTCC GTCTTTACCG GCAGGGGGGG TGTAAACCGT
GATTGA
 
Protein sequence
MKLKTKLFGQ VFSFRDVREV MAKANEEKSG DILAGIAASS AAERVAAKIV LSELTLEDIF 
NNPAVPYEED EVTRIIYDNL NRSIYSEIKG WTVAQLREFI LKNETGPSCI RRVSRGLTSE
MVAAVAKLMS NLDLIYGAKK IQVTAHCNTT IGEKGCLAVR LQPNHPTDSP EGILSSLREG
LSYGIGDALI GLNPVEDTVP ITTRSLETMY NFAQEWEIPT QVCVLAHVTT QMKAIEKGAP
GDLIFQSLAG TQAGNEAFGI SNDILKEAQE VALKYGRSTG PNVMYFETGQ GSELSSDAHH
GVDQVTLEAR CYGLAKQFNP FLVNTVVGFI GPEYLYDAKQ VTRAGLEDHF MGKLTGIPMG
VDACYTNHMK ADQNDIENLA VLLTSAGINY FMGIPMGDDV MLNYQCTSFH DIAALRQTVN
LRPLPAFEKW MEKMGLLKNG YLTSKAGDPS VFTGRGGVNR D