Gene Dred_1281 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1281 
SymbolasnC 
ID4958208 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp1367575 
End bp1368864 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content44% 
IMG OID640180458 
Productasparaginyl-tRNA synthetase 
Protein accessionYP_001112640 
Protein GI134299144 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0017] Aspartyl/asparaginyl-tRNA synthetases 
TIGRFAM ID[TIGR00457] asparaginyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGGTA CATTAATTAG ACATCTAGGA AAACATGTGG ATGAAGAAGT AAGTATTCAG 
GGATGGTTGT ACAATAAAAG GTCATCCGGG AAAATACAAT TTTTGATTGT ACGGGATGGA
ACTGGATTAG TACAGGGGGT TTTAGTTAAA AAAGAAGCCC CAGAGATTTT TGAATTGGCT
AAAGAACTTA CCCAAGAATC CGCCATACGG TTAAGGGGAA TCGTTCGGGA AGAGCCTCGT
TCAATGGGAG GCTATGAGCT TACCGTTACT GGTCTGGAAA TTATTAACCT TGCTCAAGAA
TATCCCATTT CTCATAAAGA GCATGGCGTT GATTTCTTAA TGGACCGTCG GCATCTATGG
ATGCGAACAC CCAGACAAAA TGCAATTTTG CGGATCCGGG CCGAGATAGA ACAAGCAGCC
AGAGATTTTT TCAATCAAAA TGATTTTACA CTGGTGGATA GTCCCATTAT TACACCTGCA
GCCTGTGAAG GGACCACAAC ATTATTTGAG TTAGATTATC ATGGGGAAAA GGCGTACTTA
TCTCAAAGCG GCCAATTGTA TAACGAAGCT TCTGCCATGG CAGTAGGTCG CATGTACTGC
TTTGGACCGA CCTTCCGGGC TGAGAAATCA AAAACCCGTC GACATCTAAT GGAATTCTGG
ATGATTGAAG CAGAGGCAGC TTTCTTCGAT TTCGAAGACA ATATGAAACT GCAGGAAGAA
ATGGTTTATT TTATTGTTCA GCGGGTTCTT GAACGCCGGC GCCAGGATTT AGAGTTGCTG
GGACGGGATA TTAGTAAGCT GGAAGCTATT AAATTACCAT TTCCACGTCT TAGCTATACC
GAGGCAGTTG AACTGTTAAA GAGTAAGGGT GAAGCCTTTG AATGGGGCGA AGATTTTGGA
GCGCCCCACG AAACTATTAT CTCAGAGAAT TTTGAATCAC CTGTATTTAT TCACCGTTAC
CCCACAGAAA TAAAAGCCTT TTACATGAAA CCTGATCCTG AGGATGGAAG GGTTGTGCTG
GGGGCGGACC TAATTGCTCC AGAAGGCTAT GGTGAGATGA TAGGTGGTGG CCAGCGTATT
GATGATCTGC AACTTCTTGA GCAGAGGTTG GAAGAACATA AGTTACCCAA GGAAGCCTTT
GAATGGTACC TGGATTTAAG GCGCTACGGC AGTGTACCAC ACTCTGGATT TGGCCTTGGT
CTAGAACGTA CTGTTGCCTG GATTTGTAAA TTGGATCATG TGAGGGAAAC CATTCCTTAT
CCACGGATGC TTTATCGTGT TTATCCATAA
 
Protein sequence
MQGTLIRHLG KHVDEEVSIQ GWLYNKRSSG KIQFLIVRDG TGLVQGVLVK KEAPEIFELA 
KELTQESAIR LRGIVREEPR SMGGYELTVT GLEIINLAQE YPISHKEHGV DFLMDRRHLW
MRTPRQNAIL RIRAEIEQAA RDFFNQNDFT LVDSPIITPA ACEGTTTLFE LDYHGEKAYL
SQSGQLYNEA SAMAVGRMYC FGPTFRAEKS KTRRHLMEFW MIEAEAAFFD FEDNMKLQEE
MVYFIVQRVL ERRRQDLELL GRDISKLEAI KLPFPRLSYT EAVELLKSKG EAFEWGEDFG
APHETIISEN FESPVFIHRY PTEIKAFYMK PDPEDGRVVL GADLIAPEGY GEMIGGGQRI
DDLQLLEQRL EEHKLPKEAF EWYLDLRRYG SVPHSGFGLG LERTVAWICK LDHVRETIPY
PRMLYRVYP