Gene Dred_1257 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1257 
Symbol 
ID4957722 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp1328829 
End bp1329851 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content44% 
IMG OID640180428 
ProductFMN-dependent alpha-hydroxy acid dehydrogenase 
Protein accessionYP_001112616 
Protein GI134299120 
COG category[C] Energy production and conversion 
COG ID[COG1304] L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTTAA AAACAATTAA AACAGAAGCA AAGGACAAAT TAAAAGGCTA TTGTCGCGTT 
TGTCCAGTGT GTGATGGTCG TGCCTGTAGC GGGGAAGTTC CTGGTATGGG TGGTACTGGT
ACCGGTGTTA GTTTTCGCAA CAATTTAAAT GCTTTAGCTT CCTATAACTT AAACATGCGT
ACCTTACACA ATGCTAAGAA CCCCAGCACC GAAACTGAAT TATTTGGTGT TGCACTTACT
TCCCCCATTA TGGCTGCGCC CATGACTGGT ACTCCATACA ATATGGGAGG ATCATTATCA
GAGAAAGAAT TCATTAGCAT GATTGTTTCC GGGAGCAAAC AGGCAGGAAC ACTGGGTTGG
ACCGGTGACG GCGCTGACCC AGAAATGTAT AACTCAGGTC TAGAAGCCAT CACAAATGAA
CAAGGATACG GTATTCCTAT TATTAAGCCA CGGGAACAAA ATGTTATTAT TGAATGTATT
GGTCGTGCCG AACGAGCTGG GGCCAAAGCA GTTGGGGTTG ATATTGACGG TGCTGGTCTT
GTAACGATGG CCCTAAAAGG TCAACCTGTA GGTCCTAAAT CAAAAAGAGA AATTAAGGAA
CTTGTTAATG CCACTAAGTT GCCTTTCATT CTTAAGGGAA TTATGACGGT TGATGAAGCC
GAAATGGCAG TAGAAGCTGG AGTCAGTGCT ATTGTAGTAT CGAACCACGG TGGTCGTATA
TTGGATTTTA CTCCAGGAGC AGCTGATGTA TTGCCTGCCA TTGCTGCAGC TGTAAAAGGG
AAGGTTACAA TCCTTGCCGA TGGCGGTGTA CGTACCGGTG TGGATGTTCT GAAACTTCTT
GCCCTGGGGG CGGATGGGGT ACTGGTTGGA CGTCCATTGG TTGTTGGGGC CTTCGGTGGG
CATACTGAAG GGGTTAAGTT CTTGATTGAA AAAATGACAT CTGAACTAAA ACAAGCTATG
ATTTTAACTG GCTGCAATAC TATTAAAGAA ATAAATGACA GTGTAATTTA TAATGCGCAA
TAA
 
Protein sequence
MDLKTIKTEA KDKLKGYCRV CPVCDGRACS GEVPGMGGTG TGVSFRNNLN ALASYNLNMR 
TLHNAKNPST ETELFGVALT SPIMAAPMTG TPYNMGGSLS EKEFISMIVS GSKQAGTLGW
TGDGADPEMY NSGLEAITNE QGYGIPIIKP REQNVIIECI GRAERAGAKA VGVDIDGAGL
VTMALKGQPV GPKSKREIKE LVNATKLPFI LKGIMTVDEA EMAVEAGVSA IVVSNHGGRI
LDFTPGAADV LPAIAAAVKG KVTILADGGV RTGVDVLKLL ALGADGVLVG RPLVVGAFGG
HTEGVKFLIE KMTSELKQAM ILTGCNTIKE INDSVIYNAQ