Gene Dred_1252 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1252 
Symbol 
ID4957841 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp1324114 
End bp1324779 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content40% 
IMG OID640180423 
ProductL-serine dehydratase, iron-sulfur-dependent, beta subunit 
Protein accessionYP_001112611 
Protein GI134299115 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1760] L-serine deaminase 
TIGRFAM ID[TIGR00719] L-serine dehydratase, iron-sulfur-dependent, beta subunit 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.809325 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTTATA ATTCAATTTT TGATATTATT GGGCCTGTGA TGGTGGGACC TTCAAGTTCT 
CACACCGCAG GTGCAGCTAG AATAGGTAAA ACAACTCGCA ATATTTTTGG TAGAGTACCT
ACCAGAGCAG AGATTACGTT GTACGGTTCC TTTGCTCAAA CCTACAGGGG GCATGGGACA
GATCTCGCGT TGGTGGGGGG GATTTTAAAT TTAAACGCTA ACGATGAAAA TATTGTAAGA
TCCTTTCAGA TAGCCAAGGA TTTTGGGGTG GAAATTATAT TTAAGACTGT GGCAGAGGAG
TCAGATTATC ACCCCAATAC TGCACGGGTT TGTTTAAGTG ACAGTAAAGG GTCATTGGAA
GTAGTGGGTA TTTCAGTTGG TGGCGGTAAA ATTACAATAA CAGAAATTGA AGGTTTTAAA
ATATCTCTAA GTGGAGATAG CCCTACACTG TTAGTATTTC ATCATGATCG ATTTGGAGCC
ATTGCAAAGG TAGCCCAGGT TCTGGCTTGC AATGAAATTA ATATTGGTCA TATGGAAGTA
GCCAGAAGGT CAAGGGGAGA TCAGGCTCTA ATGGTTATTG AAACTGATCA GGACCTAACA
AATGAAACCA TTAAAGCTGT TAAAAGGATT GATCCTGAGT ACCGGATTGC TTTAATTATT
CCGTAA
 
Protein sequence
MRYNSIFDII GPVMVGPSSS HTAGAARIGK TTRNIFGRVP TRAEITLYGS FAQTYRGHGT 
DLALVGGILN LNANDENIVR SFQIAKDFGV EIIFKTVAEE SDYHPNTARV CLSDSKGSLE
VVGISVGGGK ITITEIEGFK ISLSGDSPTL LVFHHDRFGA IAKVAQVLAC NEINIGHMEV
ARRSRGDQAL MVIETDQDLT NETIKAVKRI DPEYRIALII P