Gene Dred_1212 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1212 
Symbol 
ID4958343 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp1288031 
End bp1289488 
Gene Length1458 bp 
Protein Length485 aa 
Translation table11 
GC content48% 
IMG OID640180382 
Producthypothetical protein 
Protein accessionYP_001112571 
Protein GI134299075 
COG category[R] General function prediction only 
COG ID[COG3497] Phage tail sheath protein FI 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.127356 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGTATA AACACGGGGT ATATATTAGC GAGGTTCCAA CCAGCGTTAT CCCGCCCGTT 
CAAGCAAGCG CAGGATTGCC GGTGGTTGTT GGAACAGCGC CGATAAATCT TGCTGAAGAC
CTTACCTATG TAAATAAGCC CCTGCTGGCG TACACCTATG CCGAGGCTGT TGGAGGTTTG
GGGTATTCAG CTGATTGGGA AAACTTCACT TTGTGCGAGT TCATGAAGTC GCACTTTGCT
TTGTTTAACG TAGCGCCGGT TGTGCTTATA AACGTTCTTG ATCCTTCCGT CCACAAAAAA
GATGTAGCGG CTGCTGATTT AAACGTTGTC AATGGCGTTG TGAATATTAA ACAAAGTGGA
ATTTTGCTTA CTTCTGTGGT GGTTAAATTA ACCGCAGCCG GCGATCCGCT GGTTAAAGAT
ACCGATTACA CTGCAGCTTT TGACTCTGAC GGTTATTTGG TAATTACGCC GATTGAGGGC
GGCGGTATTC CTGATGCTCA GGCAACATTA AACGTCGCCT ATTCACAGTT GGACCCCAGC
ATGGTTACTT CCGATGAGGT TATCGGTGGC GTGGACGTGA ATACAGGGGT TTATACCGGC
CTTGAACTAA TTAATAAGGT ATTCCCTTTG TTCCGGTTGG TTCCTGGTCA GATATTAGCT
CCCGGTTGGT CACATGACCC CGCTGTAGCT GCCGTGATGA AGGCCAAGGT CAGCGCCATT
AACGGGCTGT TTAAGGCTGT GGCTATCACC GATGTGGATG ATACTGCAGC CGGTGCTGAT
TTGTATTCTG AGGTTCCGGC CTGGAAAACA AACAATAACT ACACCGATAA GCTGCAAATA
GTGTGTTGGC CCAGGATTAA ACTGGGTGAT GAGATTTACC ACATGTCCAG CCAGGTCGCG
GGTGTTACTT GCGTGGTTGA CGGCCAGAAT GATGATATTC CTTACGTCAG TCCGTCTAAT
AAAAACCTGC AATGCAACGG GGCTTTAGTG GATTCCGGTG ATGAGGTTAC TCTGGATCCG
CAGCAAGCTG CCTATTTAAA TGGCGAGGGC ATTATTACGG CGCTCAATTT TATTGGCGGC
TGGAAGCTCT GGGGTAACAG GACCGGCGCT TACCCGGGAA GCAGTGACGT GAAAGATACT
TTTATCCCGG TGCGCCGCAT GTTTAACTGG ATCGGCAACA CTATTATTCT TACTTATTGG
CAGAAGGTTG ACGATCCGAC TAATAAACGG CTGATTCAGA CTGTTGTGGA CAGCCTGAAC
ATTTGGCTTA ACGGGCTTAC GGCCCGAGGT GCTCTCTTGG GTGGCCGGGT TATATTCTCA
TCCGATGAAA ACCCGGTAAC TGATTTGTTA AACGGCGTTG TACGTTTTCA CCTCTATATC
ACTCCGCCAA TTCCGGCTGA GGATATGGAG TTTGTGCTCG AATTCGATGT AAACTACCTG
AACAGTTTGT TCGCGTAG
 
Protein sequence
MPYKHGVYIS EVPTSVIPPV QASAGLPVVV GTAPINLAED LTYVNKPLLA YTYAEAVGGL 
GYSADWENFT LCEFMKSHFA LFNVAPVVLI NVLDPSVHKK DVAAADLNVV NGVVNIKQSG
ILLTSVVVKL TAAGDPLVKD TDYTAAFDSD GYLVITPIEG GGIPDAQATL NVAYSQLDPS
MVTSDEVIGG VDVNTGVYTG LELINKVFPL FRLVPGQILA PGWSHDPAVA AVMKAKVSAI
NGLFKAVAIT DVDDTAAGAD LYSEVPAWKT NNNYTDKLQI VCWPRIKLGD EIYHMSSQVA
GVTCVVDGQN DDIPYVSPSN KNLQCNGALV DSGDEVTLDP QQAAYLNGEG IITALNFIGG
WKLWGNRTGA YPGSSDVKDT FIPVRRMFNW IGNTIILTYW QKVDDPTNKR LIQTVVDSLN
IWLNGLTARG ALLGGRVIFS SDENPVTDLL NGVVRFHLYI TPPIPAEDME FVLEFDVNYL
NSLFA