Gene Dred_1203 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1203 
Symbol 
ID4958280 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp1279777 
End bp1281621 
Gene Length1845 bp 
Protein Length614 aa 
Translation table11 
GC content46% 
IMG OID640180373 
Productphage terminase GpA 
Protein accessionYP_001112562 
Protein GI134299066 
COG category[R] General function prediction only 
COG ID[COG5525] Bacteriophage tail assembly protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCAACAA AGAAACATGA TGACATAGAA TTACTTTTTC GTTTAGTTGA AAATGCTACG 
AATAATGTAG CCCCACCTCC TGATCTAAAA CTTTCGGACT GGGCTGACCT ATACCGTCGC
TTATCTTCTG AATCATCCTC CGAGCCTGGG CAATGGCGGA CTGATCGTGC CCCCTATCAG
CGCGAGATTA TGAACGCTAT CAGCGACCCG GAGATCAGCA CAGTTGTCGT TATGTCTTCC
GCCCAGATTG GCAAAACAGA ATTTCTTTTG AATGTAATAG GTTATCATAT CGATTACGAT
CCAGCTCCAA TACTCTTGAT TCAGCCTACT GATAAGATGG CCGAGGCTTT TTCAAAGGAC
AGGCTTGCAC CAATGATTAG GGATACGCCG GTATTGCGCA GCAAAGTTGC TAATGCTAAA
AGCAGAGATA GCGGCAATAC GCTTTTGCAT AAAAAATTTA CCGGTGGTCA TATAACACTT
GTTGGTGCTA ACGCTCCGAC CGGACTAGCC AGCCGGCCTA TTCGTATTGT ATTAGCTGAC
GAAGTGGACC GCTATCCTGC TTCAGCTGGA ACTGAAGGCG ATCCTTTAAC GCTGGCAAAG
AAAAGGGCAA ATACTTTCTG GAACCGTAAG TTTGTTTATG TGAGCACGCC TGGTATAAAA
GGCGTAAGCC GCATAGAAGC TGAATATGAA AACTCCACAA TGGAGGAGTG GCATGTGCCT
TGCCCTTCAT GCGGCCATTA TCAGCCGTTC AAATGGGGGC AAGTTGTGTT TGAAAGTGCA
TCAATGGCTT GTAAGCATTG CGGAGTTATC CATAGCGAGT TCGAATGGAA ACTAGGAACA
GGCAAATGGG TAGCAAGAAA GCCTGGCGCT AAATCAAGAG GATTTCATAT TAATGAATTA
GCCAGCCCTT GGAAACGATG GGCTGAGATT ATTGAGGACT TCAAGGCTGC TAAAAAAGAA
GCCAAGAAGG GCAATATCGA ACTTCTTAAA TCCTGGGTTA ATACCAGCTT GGGTGAAACC
TGGGAGGAAG AAGGAGAAGG CGTTGAGTTA GACGGTTTAC TGAAGCGCCG TGAGAGATAT
AACTGCGAGG TTCCGGATGA TGTTCTTGTT CTTACCGCAG CGGTTGACGT TCAAGATAAC
AGGCTTGAGT ATGAAATTGT AGGCTGGGGT TTGGAATATG AGAGCTGGGG CATTCAGTAT
GGCGTAATAA TGGGTGACCC GGGCCAGGAC TACGTTTGGG ATATGCTTGA CGGTGTTTTG
GATAAGAAAT ACGCACGTAA CGATGGACAA AAGTTGCAAA TCATGACAAC TTGTGTGGAC
TCCGGTGGTC ACCATACTAA AAAAGTTTAC GAGTACTGTA AGAAGCATGA ATTAAAAAGA
GTATGGGCCA TTAAAGGCGA GAGCGGCTCA GGCACTCCTT TCATTAAGCG GCCCAAGAAA
CGGAACGATG CCGGGGTATG GCTTTTTGGT ATCGGGGTTG ATGTCGGCAA GGATACCATT
ACTTCCAGGT TAAAATTATT TGAAGAAGGG CCTGGATATT GCCATTTTCC AATTGAGCAG
GATAGGGGTT ACGACCAGGC TTATTTTGAA GGATTGACTT CTGAGCACAG GGTTGTAAGG
TACACCAGAG GGCAGGCTAA GGTGGGTTGG GAAAAACGCA CCAGCGGTGC AAGAAACGAA
CCTTTTGACT TACGAAATTA CGCCACAGCA GCTCTTGAGA TATTAAATCC ACCGATGGAG
TTATTAAAGA AACGGTTGGG TAAAACTGAA GCGCAGCCGG CAGTGAGCGA GGCCAAAGCC
GCTAAAAAAA GAGCCGGGTT AGTTAATAAA GGCGTAGTCA TATAG
 
Protein sequence
MATKKHDDIE LLFRLVENAT NNVAPPPDLK LSDWADLYRR LSSESSSEPG QWRTDRAPYQ 
REIMNAISDP EISTVVVMSS AQIGKTEFLL NVIGYHIDYD PAPILLIQPT DKMAEAFSKD
RLAPMIRDTP VLRSKVANAK SRDSGNTLLH KKFTGGHITL VGANAPTGLA SRPIRIVLAD
EVDRYPASAG TEGDPLTLAK KRANTFWNRK FVYVSTPGIK GVSRIEAEYE NSTMEEWHVP
CPSCGHYQPF KWGQVVFESA SMACKHCGVI HSEFEWKLGT GKWVARKPGA KSRGFHINEL
ASPWKRWAEI IEDFKAAKKE AKKGNIELLK SWVNTSLGET WEEEGEGVEL DGLLKRRERY
NCEVPDDVLV LTAAVDVQDN RLEYEIVGWG LEYESWGIQY GVIMGDPGQD YVWDMLDGVL
DKKYARNDGQ KLQIMTTCVD SGGHHTKKVY EYCKKHELKR VWAIKGESGS GTPFIKRPKK
RNDAGVWLFG IGVDVGKDTI TSRLKLFEEG PGYCHFPIEQ DRGYDQAYFE GLTSEHRVVR
YTRGQAKVGW EKRTSGARNE PFDLRNYATA ALEILNPPME LLKKRLGKTE AQPAVSEAKA
AKKRAGLVNK GVVI