Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_1203 |
Symbol | |
ID | 4958280 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | + |
Start bp | 1279777 |
End bp | 1281621 |
Gene Length | 1845 bp |
Protein Length | 614 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640180373 |
Product | phage terminase GpA |
Protein accession | YP_001112562 |
Protein GI | 134299066 |
COG category | [R] General function prediction only |
COG ID | [COG5525] Bacteriophage tail assembly protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCAACAA AGAAACATGA TGACATAGAA TTACTTTTTC GTTTAGTTGA AAATGCTACG AATAATGTAG CCCCACCTCC TGATCTAAAA CTTTCGGACT GGGCTGACCT ATACCGTCGC TTATCTTCTG AATCATCCTC CGAGCCTGGG CAATGGCGGA CTGATCGTGC CCCCTATCAG CGCGAGATTA TGAACGCTAT CAGCGACCCG GAGATCAGCA CAGTTGTCGT TATGTCTTCC GCCCAGATTG GCAAAACAGA ATTTCTTTTG AATGTAATAG GTTATCATAT CGATTACGAT CCAGCTCCAA TACTCTTGAT TCAGCCTACT GATAAGATGG CCGAGGCTTT TTCAAAGGAC AGGCTTGCAC CAATGATTAG GGATACGCCG GTATTGCGCA GCAAAGTTGC TAATGCTAAA AGCAGAGATA GCGGCAATAC GCTTTTGCAT AAAAAATTTA CCGGTGGTCA TATAACACTT GTTGGTGCTA ACGCTCCGAC CGGACTAGCC AGCCGGCCTA TTCGTATTGT ATTAGCTGAC GAAGTGGACC GCTATCCTGC TTCAGCTGGA ACTGAAGGCG ATCCTTTAAC GCTGGCAAAG AAAAGGGCAA ATACTTTCTG GAACCGTAAG TTTGTTTATG TGAGCACGCC TGGTATAAAA GGCGTAAGCC GCATAGAAGC TGAATATGAA AACTCCACAA TGGAGGAGTG GCATGTGCCT TGCCCTTCAT GCGGCCATTA TCAGCCGTTC AAATGGGGGC AAGTTGTGTT TGAAAGTGCA TCAATGGCTT GTAAGCATTG CGGAGTTATC CATAGCGAGT TCGAATGGAA ACTAGGAACA GGCAAATGGG TAGCAAGAAA GCCTGGCGCT AAATCAAGAG GATTTCATAT TAATGAATTA GCCAGCCCTT GGAAACGATG GGCTGAGATT ATTGAGGACT TCAAGGCTGC TAAAAAAGAA GCCAAGAAGG GCAATATCGA ACTTCTTAAA TCCTGGGTTA ATACCAGCTT GGGTGAAACC TGGGAGGAAG AAGGAGAAGG CGTTGAGTTA GACGGTTTAC TGAAGCGCCG TGAGAGATAT AACTGCGAGG TTCCGGATGA TGTTCTTGTT CTTACCGCAG CGGTTGACGT TCAAGATAAC AGGCTTGAGT ATGAAATTGT AGGCTGGGGT TTGGAATATG AGAGCTGGGG CATTCAGTAT GGCGTAATAA TGGGTGACCC GGGCCAGGAC TACGTTTGGG ATATGCTTGA CGGTGTTTTG GATAAGAAAT ACGCACGTAA CGATGGACAA AAGTTGCAAA TCATGACAAC TTGTGTGGAC TCCGGTGGTC ACCATACTAA AAAAGTTTAC GAGTACTGTA AGAAGCATGA ATTAAAAAGA GTATGGGCCA TTAAAGGCGA GAGCGGCTCA GGCACTCCTT TCATTAAGCG GCCCAAGAAA CGGAACGATG CCGGGGTATG GCTTTTTGGT ATCGGGGTTG ATGTCGGCAA GGATACCATT ACTTCCAGGT TAAAATTATT TGAAGAAGGG CCTGGATATT GCCATTTTCC AATTGAGCAG GATAGGGGTT ACGACCAGGC TTATTTTGAA GGATTGACTT CTGAGCACAG GGTTGTAAGG TACACCAGAG GGCAGGCTAA GGTGGGTTGG GAAAAACGCA CCAGCGGTGC AAGAAACGAA CCTTTTGACT TACGAAATTA CGCCACAGCA GCTCTTGAGA TATTAAATCC ACCGATGGAG TTATTAAAGA AACGGTTGGG TAAAACTGAA GCGCAGCCGG CAGTGAGCGA GGCCAAAGCC GCTAAAAAAA GAGCCGGGTT AGTTAATAAA GGCGTAGTCA TATAG
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Protein sequence | MATKKHDDIE LLFRLVENAT NNVAPPPDLK LSDWADLYRR LSSESSSEPG QWRTDRAPYQ REIMNAISDP EISTVVVMSS AQIGKTEFLL NVIGYHIDYD PAPILLIQPT DKMAEAFSKD RLAPMIRDTP VLRSKVANAK SRDSGNTLLH KKFTGGHITL VGANAPTGLA SRPIRIVLAD EVDRYPASAG TEGDPLTLAK KRANTFWNRK FVYVSTPGIK GVSRIEAEYE NSTMEEWHVP CPSCGHYQPF KWGQVVFESA SMACKHCGVI HSEFEWKLGT GKWVARKPGA KSRGFHINEL ASPWKRWAEI IEDFKAAKKE AKKGNIELLK SWVNTSLGET WEEEGEGVEL DGLLKRRERY NCEVPDDVLV LTAAVDVQDN RLEYEIVGWG LEYESWGIQY GVIMGDPGQD YVWDMLDGVL DKKYARNDGQ KLQIMTTCVD SGGHHTKKVY EYCKKHELKR VWAIKGESGS GTPFIKRPKK RNDAGVWLFG IGVDVGKDTI TSRLKLFEEG PGYCHFPIEQ DRGYDQAYFE GLTSEHRVVR YTRGQAKVGW EKRTSGARNE PFDLRNYATA ALEILNPPME LLKKRLGKTE AQPAVSEAKA AKKRAGLVNK GVVI
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