Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_1200 |
Symbol | |
ID | 4958258 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | + |
Start bp | 1277449 |
End bp | 1278120 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640180370 |
Product | thymidylate synthase, flavin-dependent |
Protein accession | YP_001112559 |
Protein GI | 134299063 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1351] Predicted alternative thymidylate synthase |
TIGRFAM ID | [TIGR02170] thymidylate synthase, flavin-dependent |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.001686 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGGTAA AACTGATTAA CTATACACCT AATCCGGAGG ATGCAATAAT TAAAGCTGCT GCTAACTGCT GGCAGTCAAC GCCAAGGGAT GAAATATTGG ATTTAATAAT AAAGGCCGGG CACTTAACTC CGTTAGAGTT TGCGACTTTT AATTTTGAGG TGTCAGGCGT TTCCCGAGCG CTTACTCACC AGCTAGTTAG AAAACGTGTG GGGGTTGGAT TCGCCCAGGA GTCACAAAGG TATGTAAAAT ATAACGAGAA CGGATTTGAA TATGTAACAC CTCCAAGAAT TCAGAATTGC GATAAAAGTA TTTTATACAT TGACAAAACG GCGCATCAAA TTTACCAACA GGCAATGTTT ATCATCCAGG TCGCCTATGA GCAGCTAGTC GATATAGGAA TACCGGCTGA GGATGCAAGG TTTGTTTTAC CCAACGCCTG CTGTTCAAAA ATCCATGTAA CAATTAATTA TCACGCACTG TTTGATTTGG CAAAGGAGCG GCTCTGCGAT AAGGCCCAAT GGGAAATAAG AGAACTTGTG GCGGGGATGA AAAAAGAGGT TCAAGAAATA AGTACTACAT TGGCCGGGTA CCTACAACCA AAATGCTACT GGCTGCAAAG ATGCCCAGAG AAACGATCAT GTGGTAAGGT GGGGTTTCTC TGTGAGAAGT GA
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Protein sequence | MQVKLINYTP NPEDAIIKAA ANCWQSTPRD EILDLIIKAG HLTPLEFATF NFEVSGVSRA LTHQLVRKRV GVGFAQESQR YVKYNENGFE YVTPPRIQNC DKSILYIDKT AHQIYQQAMF IIQVAYEQLV DIGIPAEDAR FVLPNACCSK IHVTINYHAL FDLAKERLCD KAQWEIRELV AGMKKEVQEI STTLAGYLQP KCYWLQRCPE KRSCGKVGFL CEK
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