| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_1187 |
|---|
| Symbol | |
|---|
| ID | 4957973 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum reducens MI-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009253 |
|---|
| Strand | + |
|---|
| Start bp | 1262627 |
|---|
| End bp | 1263142 |
|---|
| Gene Length | 516 bp |
|---|
| Protein Length | 171 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640180357 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001112546 |
|---|
| Protein GI | 134299050 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.000288636 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAATTA ACATTAACCT TAACATCAAC GCTCCTGAGA TATGCTCAAC TATTCGCGAG
GTTGCACCTT TGCTACTGGC AGCACGTACC ACTAACGTCG TAAACGCGGC CACCAGCGCT
GCTGAAAATA GCAAATCGAA TTTTAGCTTC AAGCTTCCTG CCGATCAAAA AGAAAACACC
ACTCCCGATA AGGCTGAAGT TAAAGCTGCA CCTGAGAAGG AAAAACCGGC AAAAGCCAAC
GATAAGGCCA AGCAGCAAAA AGAACAAAAG CAGGAACCCG AGCCTGCGCC GGAGCCGGAG
CCAGAGAAAA CCACCGAAGA ACCTGCATCG GAGAATGTTA ACGATACTCA GCCCGAGTAC
ACAATGGAAC AGGTTAGGGC CAAGTTAATG GCGCTAGCTC AGGACGGCAA GCAGGCCCAG
GTTAAAAAGA TTATTACCGA TTGCGGGGCT AAGAAGCTTA CCGATATCCC TGCGGACAAA
TACGCTGAAG TGATGGCCGC TGCGGAGGCT CTATAA
|
|---|
| Protein sequence | MEININLNIN APEICSTIRE VAPLLLAART TNVVNAATSA AENSKSNFSF KLPADQKENT
TPDKAEVKAA PEKEKPAKAN DKAKQQKEQK QEPEPAPEPE PEKTTEEPAS ENVNDTQPEY
TMEQVRAKLM ALAQDGKQAQ VKKIITDCGA KKLTDIPADK YAEVMAAAEA L
|
|---|
| |