Gene Dred_1182 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1182 
Symbol 
ID4955658 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand- 
Start bp1258679 
End bp1259809 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content46% 
IMG OID640180352 
Productphage integrase family protein 
Protein accessionYP_001112541 
Protein GI134299045 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones3 
Plasmid unclonability p-value0.0000913824 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGCTAGCT TTAAAAAGCG ACCAAATGGA ACATGGCAGG CTACCATTTA TGTAGGCCGG 
GATTCAAACG GAAAGCAGCT GTTCAAATAC GTTACCTGTG ACTCGCTAAA AGAAGCAAAG 
AGTAAGGCCC GGGAGATCGA ACAAGAGATA GAAGAAGGGC GCTTCGTCCA CCTCGACAAT 
ACCAGGGTCG TAGCCTGGAT TGAGAAGTGG ATGGAAACTA AAACGCTCTC GCCGTCCACC 
AGGGCCACAT ACAAAAGTTA TATTAAGAAC CATTATACCC CTTATTTCGG AAATTTGAAG 
CTAAAACAGT TAAATGAGAT CCACATTAAG AGATTCATGG CCGAGAAAAG TAAAACAGTT 
TCTCAGGCCA GTGTGCGCCG CATGACATCA GTGCTTAAAA CTTCCCTTGC AGATGTAATG 
AAGCAAAAAA GCCCGGCCAA GGACATCAAG CTGCCGAAAG AGGAAAAGTA TACGCCCAGG 
GTCCCCAACG ATAAAGAGAT GGAAACCATC CACAATGCAG TTAGGGGTAC CAGGGACGAA 
CCCATAGTGC TTTTAGCAGC TTGGTGCGGA TTGCGCCGAG GTGAAATTTT TGCTTTGCGC 
TGGAATGATA TCGATTGGAA TAATGGCACT CTCAGAGTTG ATGAAGCAAA GAGTATAAAT 
GAGGATAATT TATACGAGGA TAAACGGCCC AAAAGCGAAA ACGGACTCCG CGAAGTAATT 
GTGCCGGAAT ACTTAATGGG GCTGCTTGAG GATATGCGAA AGCCTAAAAA GCGGAAAAGA 
AAAAAGAAGG ACCAGGAGCC GACCAACATC GTAGAGATAA GCAATAACTC AGATCACCAG 
ATATTTAACA TGCGCCCGGA CAGTTACTCG AGCTATTGGG CAGCATTCGT GCGAAATAAA 
AAGCTGCCAG AAATAAGATT TCACGACCTG CGGCACTACC ACGCCAGCTG GCTATACGCC 
AGGGGAATAC CGGACCAATA TGCCGCCCAA AGGCTAGGAC ACGACATACG AGTTCTAAAG 
ACGATATACC AGCACCTGGG CCTGGACAGG CAGCATGAGA TAGACAACAA CATCAGGCAG 
ATGTATGACA ACCAAAACAA AAAAGAAGAA ACCCGCCAAA CTTCCGAGTA A
 
Protein sequence
MASFKKRPNG TWQATIYVGR DSNGKQLFKY VTCDSLKEAK SKAREIEQEI EEGRFVHLDN 
TRVVAWIEKW METKTLSPST RATYKSYIKN HYTPYFGNLK LKQLNEIHIK RFMAEKSKTV 
SQASVRRMTS VLKTSLADVM KQKSPAKDIK LPKEEKYTPR VPNDKEMETI HNAVRGTRDE 
PIVLLAAWCG LRRGEIFALR WNDIDWNNGT LRVDEAKSIN EDNLYEDKRP KSENGLREVI 
VPEYLMGLLE DMRKPKKRKR KKKDQEPTNI VEISNNSDHQ IFNMRPDSYS SYWAAFVRNK 
KLPEIRFHDL RHYHASWLYA RGIPDQYAAQ RLGHDIRVLK TIYQHLGLDR QHEIDNNIRQ 
MYDNQNKKEE TRQTSE