| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_1178 |
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| Symbol | |
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| ID | 4955612 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | + |
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| Start bp | 1251781 |
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| End bp | 1253184 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640180347 |
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| Product | VanW family protein |
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| Protein accession | YP_001112537 |
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| Protein GI | 134299041 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2720] Uncharacterized vancomycin resistance protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGGAA GAATTGTTCT GTTAGGTATA GTTGCTTTTT TTATAGGAGT AGCCGTAGCA
TTTTTTGAAA TGGAAAGTGC AGAGGCCAGA AAAATACCTG CAGGTACGTA TGTCCAGGGA
GTTGAACTGT CTAACCTTGA AAAAAAGCAG GCAGAGCAAA GACTAGTGCA GATAGCAGAA
AGTATCATGA ACAGGCAAGC CACCCTGACT TATCAAGACA AATCTTGGAC TTTTTCCTTA
CAACAACTTG GTGTGGTTGT TAATGTGGAA GACACTTTGT ATAAGGCACT GCAGGGGAAA
GAACATTCCT TCATAAAGGA AATTACTACC TATTTTTATC CAGAAAAAAA AGAAATTACT
CTTACTATGG CAGTGAACAA AGAGAAACTA AAAACGGTAC TGGCACCTAT TTTTCAAACT
ATTGAGAGAC CTGCCACCGA TGCTGTGCTA ACAGTACTGG ATAATGAAGA GATATTGGTA
AAGCCAGATC AAAAGGGTAT CAAGGTTGAT GTAAAAAAAT TATGTGAAGA TCTATTAAAA
GCCAGTGTAA ATCAGGAAAA CCCGAGGGTG CAATTTAAAA TTATAGAAAC TTTTGCCGCT
AAAACCCTAG CAGATATTCA AGGGTTGAAT ATCAATGGAA AGATTTCTAG CTTCACCACA
AATTTTAACG GTAAGAATGT TAATCGCACT ATCAATATAA GGACTGCAGC TAGGAAGATA
GATGGTTTAA TACTGGCTCC CGGAGAGGAG TTTTCTTTCA ACAGGAGAGT GGGAGAACGG
ACAAGCAATG CTGGTTATCG ACCCGCAGCG GTGATTGTAG GAAACAAATT CGATGATGCT
CTGGGAGGTG GTATTTGTCA GGTATCAACT ACACTTTATA ACGCTATTTT ACTAGCAAAT
CTAACTCCCA GTGAAAGACA TAATCACTCT TTGGCCATTA GTTATGTTCC CCTGGGGCGG
GATGCGGCGG TTGCCTGGGA TTTCCTTGAT TTTAAATTCA AAAATACTTT GCCGGGACAT
CTTTATCTGC GAACCATTGT TGGTAGAGAT TATATTACTG TTCAGGTTTA TGGGGATGTC
AATCAAAAAA GAGACATTCT TATTCGCAGT TGGGTAACGG AAATCATAGA ACCAGATGTA
AAAAAGGAAA CTGACCCTAA ACTTCAGCCA GGTCAGGAAA TTTTAATACA AGCCGGTTCT
CCTGGTTTTA AGGCCCAGTC AGAACGGGTT ATACGGGAAA AGGGTGTGGT TATTAAAAGA
GAAGCGTTAC CCACCAGTTA TTATCATGCC CGTGCAAAAC AAGTGAAAGT TGGCCCTGAG
CAAACAAACA AGCCAATGGG AGAAAACTCT GTGGAACAAC AGGAACCGGA AATAGAAAAG
AACCTTGCGC AAACTGAATC TTAA
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| Protein sequence | MAGRIVLLGI VAFFIGVAVA FFEMESAEAR KIPAGTYVQG VELSNLEKKQ AEQRLVQIAE
SIMNRQATLT YQDKSWTFSL QQLGVVVNVE DTLYKALQGK EHSFIKEITT YFYPEKKEIT
LTMAVNKEKL KTVLAPIFQT IERPATDAVL TVLDNEEILV KPDQKGIKVD VKKLCEDLLK
ASVNQENPRV QFKIIETFAA KTLADIQGLN INGKISSFTT NFNGKNVNRT INIRTAARKI
DGLILAPGEE FSFNRRVGER TSNAGYRPAA VIVGNKFDDA LGGGICQVST TLYNAILLAN
LTPSERHNHS LAISYVPLGR DAAVAWDFLD FKFKNTLPGH LYLRTIVGRD YITVQVYGDV
NQKRDILIRS WVTEIIEPDV KKETDPKLQP GQEILIQAGS PGFKAQSERV IREKGVVIKR
EALPTSYYHA RAKQVKVGPE QTNKPMGENS VEQQEPEIEK NLAQTES
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