Gene Dred_1170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1170 
Symbol 
ID4955285 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp1243396 
End bp1244496 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content44% 
IMG OID640180339 
Productglutamate 5-kinase 
Protein accessionYP_001112529 
Protein GI134299033 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0263] Glutamate 5-kinase 
TIGRFAM ID[TIGR00451] uncharacterized domain 2
[TIGR01027] glutamate 5-kinase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.197851 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGAACAGC ATAGAAGGAT CGTTATAAAA ATCGGTAGCA GTAGCCTGAC GAATCGTGAA 
AAATTACTGG ATGAATACAA GTTAAAAGCC CTCGCAAGTG CTGTGGCAAA GCTTTTTAAC
CAAGGTTGGC AACCAATTCT TGTATCTTCG GGAGCAGTTG CTGCGGGATT GGGTCACCTC
GGTTGGAACT GCACTCATTT AACGATGCCG GAAAGACAGG CGGCCGCTGC CGTTGGTCAA
GGGCTATTGA TGGAAAAGTA CAATGAGTTA TTTCAATCCT TGGGCATCAA GGTTGGGCAA
ATTCTCCTTA CCCGTGCAGA TTTTGCGGAT CGTAAACGTT ACCTAAATGC CCGCAACACA
CTAAATGTAC TGTTAAATCG TCATGTTTTG CCCATTGTCA ATGAGAATGA TACCGTAACC
TTTGCCGAGA TCCGTTTTGG CGATAACGAT ACCCTAAGTG CATTGGTTGC AGGTTTAGTA
GAAGCTGAAC TCCTTATTCT TCTTACAGAC ATCGATGGAC TCTATAACGG TGACCCCAGG
AAGGACCCTA ATGCAAAGTT AATTCCGGTA GTTCAGCATA TTGATGATAG CATAATTAAA
TTAGCTGGTG ATAGTGGTAG TACCGTGGGT ACCGGAGGTA TGAAAACAAA ACTAGCTGCT
GCTCGTATTG CTGCCCGCAG TGGCATAAGA ACCGTGGTGG CCAGTGCAAA AGAACCGTCA
ATTTTATCAG GCATTGCTAC AGGCGAGAAA CTGGGTACTT CCTTTGAACC CTCTGATCAT
ACTCTGAGAA GTCGCAAACA GTGGATTGCC TATGGAAGTA TAACACGCGG AACTTTGCTC
ATCGACAAAG GCGCAGTAAA GGCCCTTACA GAAAGACATA AAAGTTTACT GGCCGTTGGT
ATAATTGGTA TAAAGGGAGA TTTCACTGCA GGAAGCGTTG TATCAGTTGC TGATGAACAG
GGTGTTGTCC TGGCAAAGGG TATAACAAAC CTTTCTTCTG AGGATTTACG CCTTGTTAAC
AAAAATACAC GTCACGGATT GGAAGTTATT AATCGGGACT GGTTAGTCTG TGAAAGGGGT
TTTTCTATAT GTCAAATGTA A
 
Protein sequence
MEQHRRIVIK IGSSSLTNRE KLLDEYKLKA LASAVAKLFN QGWQPILVSS GAVAAGLGHL 
GWNCTHLTMP ERQAAAAVGQ GLLMEKYNEL FQSLGIKVGQ ILLTRADFAD RKRYLNARNT
LNVLLNRHVL PIVNENDTVT FAEIRFGDND TLSALVAGLV EAELLILLTD IDGLYNGDPR
KDPNAKLIPV VQHIDDSIIK LAGDSGSTVG TGGMKTKLAA ARIAARSGIR TVVASAKEPS
ILSGIATGEK LGTSFEPSDH TLRSRKQWIA YGSITRGTLL IDKGAVKALT ERHKSLLAVG
IIGIKGDFTA GSVVSVADEQ GVVLAKGITN LSSEDLRLVN KNTRHGLEVI NRDWLVCERG
FSICQM