Gene Dred_1168 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1168 
Symbol 
ID4955292 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp1241297 
End bp1242142 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content45% 
IMG OID640180337 
Productpyrroline-5-carboxylate reductase 
Protein accessionYP_001112527 
Protein GI134299031 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0345] Pyrroline-5-carboxylate reductase 
TIGRFAM ID[TIGR00112] pyrroline-5-carboxylate reductase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000092936 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAGAAG GAAAAACCTT TTTTTTCGTC GGTGCCGGTA ATATTTGCGA ATCTATGATA 
AAAGGAATTT TATCCGCTGG GATCGTACGT CCCGGTGAGA TCCGTGTTGC AAACCGCAGT
AACACTGAGC GTTTAAACTA TCTACGTAAC TACTATGGTA TTGTTCCTGT TACAGATAAG
CAAACCGCCG CTGCCAAAGC TGATATTATT GTCTTGGCAA TGAAACCCCA GGATGTATTT
GCCGCCTTGG ATGAGCTTAG GGATAGCACT CAAGAAAACC AAATTATCAT TTCTGTCCTG
GCAGGTGTAC CCACTTCACT CATTGAAGAT AGTCTAAATA CGCAAATTGC CGTTATCCGG
GCCATGCCTA ATACTTCCTG TGCCATACTG GAGTCTGCTA CGGGTCTTAG TGCCGGTCGC
TTTACCACTC CGAATCAACT TAAGTTAGCC GAAGAGATTT TTTGCATGAT GGGTGAAGTT
GTTGTTGTCG AAGAACATCT ATTGGATGCT GTTACAGGCC TTTCCGGCAG TGGCCCCGCT
TACATTTATT ATTTAGTAGA AGCCATGGAA AAAGCCGGCG AGACCGCCGG CATACCCAGA
GAACTGGCCC GCCCCCTGGT TTTAAAAACT TTATTGGGTG CAGCAAAAAT GCTTATGGAG
ACAGGTGAAA ACCCCGAAGA ACTGAGACGT CAGGTCACTT CACCAAACGG AACTACCATG
GCAGGCATTA ATGAATTAAA TAAGGGAGAC TTCCAAAACA CCCTCCGTAA AGCAATTCTT
AAAGCCACCC GTCGTTCCCA AGAACTGGGG CGGGTTATTA TTGAGAAACA ATATGCTCAA
AAATAA
 
Protein sequence
MLEGKTFFFV GAGNICESMI KGILSAGIVR PGEIRVANRS NTERLNYLRN YYGIVPVTDK 
QTAAAKADII VLAMKPQDVF AALDELRDST QENQIIISVL AGVPTSLIED SLNTQIAVIR
AMPNTSCAIL ESATGLSAGR FTTPNQLKLA EEIFCMMGEV VVVEEHLLDA VTGLSGSGPA
YIYYLVEAME KAGETAGIPR ELARPLVLKT LLGAAKMLME TGENPEELRR QVTSPNGTTM
AGINELNKGD FQNTLRKAIL KATRRSQELG RVIIEKQYAQ K