Gene Dred_1166 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1166 
Symbol 
ID4957803 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp1238861 
End bp1239766 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content46% 
IMG OID640180335 
Producthomoserine kinase 
Protein accessionYP_001112525 
Protein GI134299029 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0083] Homoserine kinase 
TIGRFAM ID[TIGR00191] homoserine kinase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000188911 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAGCAG AAACCATTAA GGTTCAAGTT CCGGCCACCA CTGCTAATAT GGGCCCTGGT 
TTTGATTGTT TAGGAATGGC ACTGGGGTTA TACAATGAAA TTCATATGAG CCTGTCTCCC
GGTAAATTAT TTATAGACGT CCAGGGAGAA GGGGCAGAAG ATATAAAAAG GGATGAAACT
AATATTGTCT GGCAGGCGGC CCAACGAGTT TTTCAAGAAC TGGATTTAGA GAATCCGGGA
CTGACAATCA AACTAATTAA TCAAATTCCA ACCTCCAGGG GCCTGGGAAG CAGTGCAGCG
GCCATTGTTG GAGGCTTAAT TGCAGCCAAC CAGCTTACCG GGGGAATTCT GGATCAGGAT
CGCCTGCTTG GGTTGGCAAC TGAACTGGAA GGTCATCCAG ATAATGTTGC ACCAGCCCTC
CTGGGGGGGA TTGTTATCTC AGTAGTGGCA GAAGGAGAAG TACATTATAT TAAGATAAAT
CCTCCAGAAG ATTTAAATAC GGTGGTTGCC ATCCCTGATT TTTTGCTATC CACACGGAAG
GCCCGGGAAG TATTACCAAA GACAGTCAGC TTAAGGGATG CTATTTTTAA CCTGAGTCAC
ACTGCCCTGT TGGTTGGAGC CCTATGCGAA AAACGTTTAG ATTTGTTGTC CGTGGCCGGG
AAAGATGTAT TACACCAACC ATACCGTGCC AGTTTAATTC CAGGTATGAA AGAAGTGATC
CAAGCCGCCA ATGAAGCGGG TGCCTTAAAC GTGACATTAA GCGGGGCAGG TCCCACTGTT
ATTGCCCTGA CCAGTGGATT TTCAGAAGAA ATTGCTCGCT CCATGGAACA AACCTTTCAA
AGGGCGAACG TCAAATGCCA GGTGAAAATG CTAAAACCGG CGGTTGAAGG AACTATAATT
TTGTGA
 
Protein sequence
MIAETIKVQV PATTANMGPG FDCLGMALGL YNEIHMSLSP GKLFIDVQGE GAEDIKRDET 
NIVWQAAQRV FQELDLENPG LTIKLINQIP TSRGLGSSAA AIVGGLIAAN QLTGGILDQD
RLLGLATELE GHPDNVAPAL LGGIVISVVA EGEVHYIKIN PPEDLNTVVA IPDFLLSTRK
AREVLPKTVS LRDAIFNLSH TALLVGALCE KRLDLLSVAG KDVLHQPYRA SLIPGMKEVI
QAANEAGALN VTLSGAGPTV IALTSGFSEE IARSMEQTFQ RANVKCQVKM LKPAVEGTII
L